Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40436
(684 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.13
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 27 0.13
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 23 2.1
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 2.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.7
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 6.3
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 8.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 8.3
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 407 PPVATSTTGPLQIPQQASTPIVRPEQTCQTSE 502
PPV +G + + Q ST +V Q C T E
Sbjct: 237 PPVILENSGVVHVAQDESTSLVCVAQACPTPE 268
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 407 PPVATSTTGPLQIPQQASTPIVRPEQTCQTSE 502
PPV +G + + Q ST +V Q C T E
Sbjct: 237 PPVILENSGVVHVAQDESTSLVCVAQACPTPE 268
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 245 RLDVRDRNAQLKLGDKIYFWTYVIKDGLGYRQDNGEWTVTEFVNEN 382
++++ D N QL + + +++V KDG + + F+NEN
Sbjct: 51 KINIEDENVQLYIECAMKKFSFVDKDG-NFNEHVSREIAKIFLNEN 95
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 399 TSTGFPFSLTNSVTVHSPLSCLYP 328
T F FS+ T H+PLS +P
Sbjct: 304 TPGSFNFSMAALATEHTPLSVKFP 327
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 394 RRSQPTCGYIYHGSTADTS 450
R + TC Y YH ST + S
Sbjct: 382 RGKEKTCYYPYHPSTQEDS 400
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 394 RRSQPTCGYIYHGSTADTS 450
R + TC Y YH ST + S
Sbjct: 382 RGKEKTCYYPYHPSTQEDS 400
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 299 FWTYVIKDGLGYRQDN 346
F+T V+ D + YR DN
Sbjct: 248 FFTRVVTDTIKYRNDN 263
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 8.3
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 87 PPAKLEAIYPAGLRVTVPDDGFSLFAFHGKLNEEMEGLESGHWSRDITKA 236
P A + +YP + V D+G S F + + E E S+ + KA
Sbjct: 156 PVALINELYPGVVYKCVSDNGESYAKFTISVTIDGETFEGTGPSKKLAKA 205
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 590 LVKSLRLFFSNSSLKIKVPLQILSRPW 510
++ + LF+ SL+I +P + PW
Sbjct: 117 IILAWALFYLLVSLRIDLPWRTCGNPW 143
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 590 LVKSLRLFFSNSSLKIKVPLQILSRPW 510
++ + LF+ SL+I +P + PW
Sbjct: 170 IILAWALFYLLVSLRIDLPWRTCGNPW 196
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 553 DEFEKNSLKDLTSWGAEVRF-PEEPD 627
+EFE+N L+ L S+ +V F P D
Sbjct: 289 EEFERNRLQLLESFKRKVNFYPNNQD 314
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,022
Number of Sequences: 438
Number of extensions: 4323
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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