Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40435
(389 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 173 2e-43
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 173 2e-43
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 173 2e-43
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 101 1e-21
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 50 3e-06
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 50 3e-06
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 50 3e-06
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 50 3e-06
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 50 3e-06
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 50 3e-06
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 32 0.57
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 32 0.57
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 32 0.57
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 32 0.57
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 32 0.76
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 32 0.76
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 32 0.76
AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin cross... 29 5.3
AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin cross... 29 5.3
AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin cross... 29 5.3
AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin cross... 29 5.3
AK127519-1|BAC87016.1| 1062|Homo sapiens protein ( Homo sapiens ... 29 5.3
AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2 p... 29 5.3
AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein. 29 5.3
AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein A... 29 5.3
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 173 bits (420), Expect = 2e-43
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1
Query: 1 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFG 180
AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFG
Sbjct: 47 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFG 106
Query: 181 RKGHAVGDIPGVRFKVVKVANVSLLLSTKRKR 276
RKGHAVGDIPGVRFKVVKVANVSLL K K+
Sbjct: 107 RKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 138
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 173 bits (420), Expect = 2e-43
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1
Query: 1 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFG 180
AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFG
Sbjct: 47 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFG 106
Query: 181 RKGHAVGDIPGVRFKVVKVANVSLLLSTKRKR 276
RKGHAVGDIPGVRFKVVKVANVSLL K K+
Sbjct: 107 RKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 138
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 173 bits (420), Expect = 2e-43
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = +1
Query: 1 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFG 180
AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFG
Sbjct: 47 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFG 106
Query: 181 RKGHAVGDIPGVRFKVVKVANVSLLLSTKRKR 276
RKGHAVGDIPGVRFKVVKVANVSLL K K+
Sbjct: 107 RKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 138
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 101 bits (241), Expect = 1e-21
Identities = 48/55 (87%), Positives = 49/55 (89%)
Frame = +1
Query: 112 FVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLLSTKRKR 276
FVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLL K K+
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 55
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 50.0 bits (114), Expect = 3e-06
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 4 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 183
KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR
Sbjct: 59 KGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR 114
Query: 184 KGHAVGDIPGVRFKVVK 234
D+PGV+ VV+
Sbjct: 115 ----TQDLPGVKLTVVR 127
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 50.0 bits (114), Expect = 3e-06
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 4 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 183
KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR
Sbjct: 59 KGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR 114
Query: 184 KGHAVGDIPGVRFKVVK 234
D+PGV+ VV+
Sbjct: 115 ----TQDLPGVKLTVVR 127
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.0 bits (114), Expect = 3e-06
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 4 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 183
KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR
Sbjct: 59 KGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR 114
Query: 184 KGHAVGDIPGVRFKVVK 234
D+PGV+ VV+
Sbjct: 115 ----TQDLPGVKLTVVR 127
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.0 bits (114), Expect = 3e-06
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 4 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 183
KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR
Sbjct: 59 KGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR 114
Query: 184 KGHAVGDIPGVRFKVVK 234
D+PGV+ VV+
Sbjct: 115 ----TQDLPGVKLTVVR 127
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.0 bits (114), Expect = 3e-06
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 4 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 183
KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR
Sbjct: 59 KGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR 114
Query: 184 KGHAVGDIPGVRFKVVK 234
D+PGV+ VV+
Sbjct: 115 ----TQDLPGVKLTVVR 127
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 50.0 bits (114), Expect = 3e-06
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 4 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 183
KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR
Sbjct: 59 KGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR 114
Query: 184 KGHAVGDIPGVRFKVVK 234
D+PGV+ VV+
Sbjct: 115 ----TQDLPGVKLTVVR 127
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 32.3 bits (70), Expect = 0.57
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 230 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 57
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 531 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 585
Query: 56 AELGCLASTPTFSRTM 9
+ + TP FS T+
Sbjct: 586 SSPSSASITPVFSTTI 601
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 32.3 bits (70), Expect = 0.57
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 230 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 57
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 531 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 585
Query: 56 AELGCLASTPTFSRTM 9
+ + TP FS T+
Sbjct: 586 SSPSSASITPVFSTTI 601
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 32.3 bits (70), Expect = 0.57
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 230 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 57
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 191 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 245
Query: 56 AELGCLASTPTFSRTM 9
+ + TP FS T+
Sbjct: 246 SSPSSASITPVFSTTI 261
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 32.3 bits (70), Expect = 0.57
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 230 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 57
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 191 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 245
Query: 56 AELGCLASTPTFSRTM 9
+ + TP FS T+
Sbjct: 246 SSPSSASITPVFSTTI 261
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 31.9 bits (69), Expect = 0.76
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 230 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 57
+TL+ TP + P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 215 STLQTTPSI-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 269
Query: 56 AELGCLASTPTFSRTM 9
+ + TP F+ T+
Sbjct: 270 SSPSSASITPVFATTI 285
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.9 bits (69), Expect = 0.76
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 230 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 57
+TL+ TP + P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 192 STLQTTPSI-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 246
Query: 56 AELGCLASTPTFSRTM 9
+ + TP F+ T+
Sbjct: 247 SSPSSASITPVFATTI 262
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.9 bits (69), Expect = 0.76
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 230 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 57
+TL+ TP + P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 192 STLQTTPSI-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 246
Query: 56 AELGCLASTPTFSRTM 9
+ + TP F+ T+
Sbjct: 247 SSPSSASITPVFATTI 262
>AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AK127519-1|BAC87016.1| 1062|Homo sapiens protein ( Homo sapiens
cDNA FLJ45612 fis, clone BRTHA3025073, highly similar
to Actin cross-linking family protein 7. ).
Length = 1062
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 692 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 728
>AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2
protein.
Length = 4631
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 351 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 387
>AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein.
Length = 5373
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 497 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 533
>AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein
ABP620 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 233 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 126
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,927,785
Number of Sequences: 237096
Number of extensions: 1125891
Number of successful extensions: 4207
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4207
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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