Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40429
(670 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 172 3e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 172 3e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 172 3e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 172 3e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 172 3e-43
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 1.9
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 1.9
BT003459-1|AAO39462.1| 925|Drosophila melanogaster RH30917p pro... 29 7.6
AE014298-780|AAF46066.2| 725|Drosophila melanogaster CG33080-PB... 29 7.6
AE014298-779|AAF46068.2| 925|Drosophila melanogaster CG33080-PA... 29 7.6
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 82.2 bits (194), Expect = 6e-16
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLR 626
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAP R
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPR 194
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
Score = 32.7 bits (71), Expect = 0.46
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+P+KLL MAG++DCYT
Sbjct: 192 VPRKLLTMAGIEDCYT 207
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAP
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAP 191
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
Score = 33.9 bits (74), Expect = 0.20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG++DCYT
Sbjct: 192 VPKKLLTMAGIEDCYT 207
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAP
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAP 191
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
Score = 33.9 bits (74), Expect = 0.20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG++DCYT
Sbjct: 192 VPKKLLTMAGIEDCYT 207
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAP
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAP 191
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
Score = 33.9 bits (74), Expect = 0.20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG++DCYT
Sbjct: 192 VPKKLLTMAGIEDCYT 207
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 172 bits (419), Expect = 3e-43
Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG + + HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G KIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAP
Sbjct: 154 GNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAP 191
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
KED KEWVPVTKLGRLVREGKI LE IYL+SL K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72
Score = 33.9 bits (74), Expect = 0.20
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG++DCYT
Sbjct: 192 VPKKLLTMAGIEDCYT 207
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 161 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 18
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 161 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 18
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>BT003459-1|AAO39462.1| 925|Drosophila melanogaster RH30917p
protein.
Length = 925
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 187 QTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLG 291
Q P R+K R+T+++ + F I F II F +G
Sbjct: 233 QAFPQLIRKKKRETKDYKIKIFVIIMFFIIIFLIG 267
>AE014298-780|AAF46066.2| 725|Drosophila melanogaster CG33080-PB,
isoform B protein.
Length = 725
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 187 QTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLG 291
Q P R+K R+T+++ + F I F II F +G
Sbjct: 33 QAFPQLIRKKKRETKDYKIKIFVIIMFFIIIFLIG 67
>AE014298-779|AAF46068.2| 925|Drosophila melanogaster CG33080-PA,
isoform A protein.
Length = 925
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 187 QTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLG 291
Q P R+K R+T+++ + F I F II F +G
Sbjct: 233 QAFPQLIRKKKRETKDYKIKIFVIIMFFIIIFLIG 267
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,375,548
Number of Sequences: 53049
Number of extensions: 707095
Number of successful extensions: 3274
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2777
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -