Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40423
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   4.4  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   4.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   5.8  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 123 PFFWQDIHYFQLNFR 79
           P FW  I Y++LN R
Sbjct: 310 PTFWCSISYYELNLR 324


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 411 YEKQIGYLTYLGQDTNEALKKKNW 482
           Y  ++G +  L  DTN ALKK  W
Sbjct: 128 YSFRVGIIADL--DTNSALKKNQW 149


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 252 KSKERLLKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKE 389
           +S  R LKSG P T V  S   N   N+    +  +   + E + E
Sbjct: 185 ESVSRSLKSGNPSTAVSSSSTNNNTSNISNRNQVNLPLASPEEESE 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,131
Number of Sequences: 2352
Number of extensions: 8421
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)