Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40423
         (605 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014986-1|AAH14986.1|  264|Homo sapiens leukocyte receptor clus...    50   8e-06
AF211966-1|AAG01393.1|  206|Homo sapiens LENG1 protein protein.        50   8e-06
AK126859-1|BAC86725.1|  131|Homo sapiens protein ( Homo sapiens ...    31   3.1  
BC131805-1|AAI31806.1|  913|Homo sapiens CCDC46 protein protein.       30   5.5  
AF458591-1|AAM49719.1|  590|Homo sapiens hypothetical protein pr...    30   5.5  

>BC014986-1|AAH14986.1|  264|Homo sapiens leukocyte receptor cluster
           (LRC) member 1 protein.
          Length = 264

 Score = 49.6 bits (113), Expect = 8e-06
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = +3

Query: 369 NKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPP 497
           NKE+++E + ++E  EK +G LTYLGQ   EA  +  WY +PP
Sbjct: 93  NKEYEEEKRQEKERQEKALGILTYLGQSAAEAQTQPPWYQLPP 135



 Score = 33.9 bits (74), Expect = 0.45
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 100 MNILPKKRWHVRTKE-IXXXXXXXXXXXXXXXXXXXXTETADKESRLNILKQKAKRDYSN 276
           MNILPKK WHVR K+ +                       A +E+R   L++KA+   S 
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEAQAREEEKERERRVLLAQQEARTEFLRKKARHQNSL 60

Query: 277 QE 282
            E
Sbjct: 61  PE 62


>AF211966-1|AAG01393.1|  206|Homo sapiens LENG1 protein protein.
          Length = 206

 Score = 49.6 bits (113), Expect = 8e-06
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = +3

Query: 369 NKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPP 497
           NKE+++E + ++E  EK +G LTYLGQ   EA  +  WY +PP
Sbjct: 35  NKEYEEEKRQEKERQEKALGILTYLGQSAAEAQTQPPWYQLPP 77


>AK126859-1|BAC86725.1|  131|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44911 fis, clone BRAMY3009158. ).
          Length = 131

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 539 RYLLCHWCVNTRSLWWNIIPIF 474
           R+L  HWC+  RS+ WN  P+F
Sbjct: 105 RWLDLHWCLVGRSVGWNHAPVF 126


>BC131805-1|AAI31806.1|  913|Homo sapiens CCDC46 protein protein.
          Length = 913

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 282 IPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVK 395
           + Q N  K  ++ +H     NLE  ++  N EH+ +++
Sbjct: 634 LQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQ 671


>AF458591-1|AAM49719.1|  590|Homo sapiens hypothetical protein
           protein.
          Length = 590

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 282 IPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVK 395
           + Q N  K  ++ +H     NLE  ++  N EH+ +++
Sbjct: 311 LQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQ 348


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,647,362
Number of Sequences: 237096
Number of extensions: 1091082
Number of successful extensions: 6806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6805
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)