Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40423
(605 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1136|AAF54521.1| 288|Drosophila melanogaster CG12818-P... 88 8e-18
AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p pro... 35 0.099
AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-P... 35 0.099
BT010072-1|AAQ22541.1| 882|Drosophila melanogaster LD12453p pro... 31 1.6
AE013599-1653|AAZ52808.1| 882|Drosophila melanogaster CG32904-P... 31 1.6
AY119245-1|AAM51105.1| 486|Drosophila melanogaster SD20456p pro... 29 3.7
U31961-16|AAA84415.1| 335|Drosophila melanogaster protein ( Dro... 29 6.5
AY122180-1|AAM52692.1| 359|Drosophila melanogaster LD37858p pro... 29 6.5
AE014297-2253|AAF55351.1| 359|Drosophila melanogaster CG14906-P... 29 6.5
>AE014297-1136|AAF54521.1| 288|Drosophila melanogaster CG12818-PA
protein.
Length = 288
Score = 88.2 bits (209), Expect = 8e-18
Identities = 38/65 (58%), Positives = 52/65 (80%)
Frame = +3
Query: 327 VNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEAS 506
V+LFA+ + +KTTNK+ +KE K +QE+YEKQIGYLTYLGQDTNEALK ++WY++ P+
Sbjct: 78 VDLFADYKARVKTTNKDLEKEQKEEQEKYEKQIGYLTYLGQDTNEALKVRSWYELAPKRP 137
Query: 507 SIHAP 521
+ P
Sbjct: 138 EVGDP 142
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 100 MNILPKKRWHVRTKE-IXXXXXXXXXXXXXXXXXXXXTETADKESRLNIL-KQKAKRDYS 273
MNILPKKRWHVRTKE I E A+ E+R+N L +Q + +
Sbjct: 1 MNILPKKRWHVRTKENIARVRRDQAAAAAEEKVRQEKLEFAESEARINFLRRQSGLPEKA 60
Query: 274 NQESHKQ 294
++ES ++
Sbjct: 61 SKESREE 67
>AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p
protein.
Length = 1059
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 246 KAKSKERLLKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQ 404
K K K+ L G K + NE +NL E+ ++ TN++H K+++ Q
Sbjct: 344 KKKGKDHRLTGGFASNQSDKHNL-NERLNLLTRREEELQATNEKHKKKIQKMQ 395
>AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-PA
protein.
Length = 1059
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 246 KAKSKERLLKSGIPQTNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQ 404
K K K+ L G K + NE +NL E+ ++ TN++H K+++ Q
Sbjct: 344 KKKGKDHRLTGGFASNQSDKHNL-NERLNLLTRREEELQATNEKHKKKIQKMQ 395
>BT010072-1|AAQ22541.1| 882|Drosophila melanogaster LD12453p
protein.
Length = 882
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 291 TNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQD--TNEA 464
T + S I+ H N N D + T ++ ++ + +Q++ ++ Y+T G+D T
Sbjct: 127 TTISSSSIL--HTNANTNGVDTLAATQQQQQQQQQQQQQQQQQHYHYITTTGEDGQTPTT 184
Query: 465 LKKKNWYDVPPEASS 509
+ +N+ P SS
Sbjct: 185 IVFENYNGGMPAVSS 199
>AE013599-1653|AAZ52808.1| 882|Drosophila melanogaster CG32904-PA,
isoform A protein.
Length = 882
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 291 TNVGKSEIINEHVNLFANLEDAIKTTNKEHDKEVKAKQEEYEKQIGYLTYLGQD--TNEA 464
T + S I+ H N N D + T ++ ++ + +Q++ ++ Y+T G+D T
Sbjct: 127 TTISSSSIL--HTNANTNGVDTLAATQQQQQQQQQQQQQQQQQHYHYITTTGEDGQTPTT 184
Query: 465 LKKKNWYDVPPEASS 509
+ +N+ P SS
Sbjct: 185 IVFENYNGGMPAVSS 199
>AY119245-1|AAM51105.1| 486|Drosophila melanogaster SD20456p
protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 360 KTTNKEHDKEVKAKQEEYEKQIGYLTYLGQDTNEALKKKNWYDVPPEASS 509
K N++ K++ A E + K+ Y+ YLG ++KK W +PP+A+S
Sbjct: 16 KVKNEDDWKQL-APFEGFNKEGEYVGYLGS----SIKKLEWVPLPPKAAS 60
>U31961-16|AAA84415.1| 335|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 335
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 575 VSHLHLSKLAYYRYLLCHWCVNT 507
+SH+ LSKL + R L+ WC N+
Sbjct: 224 LSHIPLSKLTHPRSLVAIWCTNS 246
>AY122180-1|AAM52692.1| 359|Drosophila melanogaster LD37858p
protein.
Length = 359
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 575 VSHLHLSKLAYYRYLLCHWCVNT 507
+SH+ LSKL + R L+ WC N+
Sbjct: 189 LSHIPLSKLTHPRSLVAIWCTNS 211
>AE014297-2253|AAF55351.1| 359|Drosophila melanogaster CG14906-PA
protein.
Length = 359
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 575 VSHLHLSKLAYYRYLLCHWCVNT 507
+SH+ LSKL + R L+ WC N+
Sbjct: 189 LSHIPLSKLTHPRSLVAIWCTNS 211
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,797,559
Number of Sequences: 53049
Number of extensions: 338352
Number of successful extensions: 962
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -