Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40410
         (427 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    30   3.8  
AF137396-5|AAG41679.1|  314|Homo sapiens HOR5'Beta11 protein.          29   6.6  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 288 YDFNYNRIYKHVAVILKIYGYISNLCYFKIFLYLMLDL 401
           Y F Y  IY H+ + L I+ YI    Y  I++++ +++
Sbjct: 66  YIFTYIYIYLHIFIYLHIFIYICICLYIFIYVFIYINI 103


>AF137396-5|AAG41679.1|  314|Homo sapiens HOR5'Beta11 protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +1

Query: 175 FWKILKPL*IHHFMANLYLFIC*VNNRMLTSKKHQKV 285
           FWK   P+ +H  M+N+YLF+  + N ++ S K +++
Sbjct: 266 FWKSAPPV-VHVMMSNVYLFVPPMLNPIIYSVKTKEI 301


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,478,863
Number of Sequences: 237096
Number of extensions: 879860
Number of successful extensions: 1753
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)