Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40407
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022793-1|AAY55209.1|  389|Drosophila melanogaster IP13578p pro...    29   7.6  
BT022256-1|AAY54672.1|  235|Drosophila melanogaster IP11438p pro...    29   7.6  
AE014134-1850|AAF52922.2|  338|Drosophila melanogaster CG5367-PA...    29   7.6  

>BT022793-1|AAY55209.1|  389|Drosophila melanogaster IP13578p
           protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 303 RYILSLFSIKNLPLIRRCYRIVDACIIRK*YYLGDSIALFGFIL 434
           RY   + +++NLPL+ RC   +   ++ +     D I L GF L
Sbjct: 115 RYPCDIQAVQNLPLVSRCLAQLINNLVDRAIVANDQIHLIGFSL 158


>BT022256-1|AAY54672.1|  235|Drosophila melanogaster IP11438p
           protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 65  FTCLCCKN*ELITNSLSQGG*RHLRCRS 148
           F CLC  N +++T++LS+G      C+S
Sbjct: 12  FGCLCGLNCQIVTSNLSEGNSSSANCKS 39


>AE014134-1850|AAF52922.2|  338|Drosophila melanogaster CG5367-PA
           protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 65  FTCLCCKN*ELITNSLSQGG*RHLRCRS 148
           F CLC  N +++T++LS+G      C+S
Sbjct: 7   FGCLCGLNCQIVTSNLSEGNSSSANCKS 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,084,798
Number of Sequences: 53049
Number of extensions: 583462
Number of successful extensions: 1181
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)