Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40406
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       26   1.00 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    26   1.3  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     25   1.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.3  
AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical prote...    23   7.0  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 26.2 bits (55), Expect = 1.00
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 499 NPYDFRFILTHITVFFYHEHCGAHNYFLYEGSYIFK 606
           N + + F+ T     FYH H G H    + G+ I +
Sbjct: 167 NTFRYAFLATEPGTQFYHSHSGHHKVNGHYGALIVR 202


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 28  TTRTAYTVTHRRYRSRTP 81
           TTRT  T T  RY +RTP
Sbjct: 306 TTRTPATSTEHRYTTRTP 323


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 118 LKKNQWGSY 144
           LKKNQWGSY
Sbjct: 144 LKKNQWGSY 152


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 36  DRLHCHSQTISFQNPIAKRLI 98
           DR  C     SFQ P+A+R++
Sbjct: 803 DRQWCQRMLASFQRPLAQRVV 823


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 67  RSRTPLQKDLLKTLSVKLKKNQWGSYETYIDKY 165
           RSR P Q  +L+T    L  +  G  ++ +D+Y
Sbjct: 548 RSRPPQQHSMLRTGPKSLAPDHEGDNDSGVDEY 580


>AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical protein
           11 protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 514 RFILTHITVFFYHEHC 561
           + ++  I +FFYH HC
Sbjct: 10  KLLVLLICLFFYHTHC 25


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,846
Number of Sequences: 2352
Number of extensions: 15107
Number of successful extensions: 65
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)