Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40406
         (702 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated p...    32   2.3  
U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated pro...    30   7.0  

>BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated
           protein 1 protein.
          Length = 2627

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +1

Query: 397 FPPPLKQCCNLKKILIP--HF*LLSSRLE-AKGIIHCNPYDFRFILTH 531
           F   L+  CNL ++ I   H  L+  RL+ AK +IH   + FRF+  H
Sbjct: 523 FMAMLRNLCNLLRVGISSRHHELILQRLQHAKSVIHSRQFPFRFLNAH 570


>U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated
           protein TP-1 protein.
          Length = 2627

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +1

Query: 397 FPPPLKQCCNLKKILIP--HF*LLSSRLE-AKGIIHCNPYDFRFILTH 531
           F   L+  CNL ++ I   H  L+  RL+  K +IH   + FRF+  H
Sbjct: 523 FMAMLRNLCNLLRVGISSRHHELILQRLQHGKSVIHSRQFPFRFLNAH 570


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,233,823
Number of Sequences: 237096
Number of extensions: 1950114
Number of successful extensions: 6984
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6983
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)