BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40405
(634 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146720-1|AAO12080.1| 147|Anopheles gambiae odorant-binding pr... 24 3.5
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 8.1
>AY146720-1|AAO12080.1| 147|Anopheles gambiae odorant-binding
protein AgamOBP15 protein.
Length = 147
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 317 ILLKTLQRTTKQMRWIRDMCTKGHHHKIAFGGYEPE*R 204
I LK L + K I D C + + H + EPE R
Sbjct: 101 IALKVLAKCNKSTGPIADACERAYSHHRCWKETEPELR 138
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.0 bits (47), Expect = 8.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 329 IIRKFVSVFACFCRKLFFTCYSARSLSTIYSFS 427
+I FVS+ + + LFF SL Y F+
Sbjct: 2864 LISSFVSITSVAAKALFFVAKLTMSLGFTYLFA 2896
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,211
Number of Sequences: 2352
Number of extensions: 12428
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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