Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40401
(462 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 133 2e-31
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 133 2e-31
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 133 2e-31
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 133 2e-31
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 133 2e-31
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 130 2e-30
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 68 1e-11
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 68 1e-11
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 64 3e-10
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 42 0.001
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 32 1.1
AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING d... 30 3.4
U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING dom... 30 4.5
BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING d... 30 4.5
BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING d... 30 4.5
AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING d... 30 4.5
AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein. 30 4.5
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 57.2 bits (132), Expect = 3e-08
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG++ +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVL 249
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 56.0 bits (129), Expect = 6e-08
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LD E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVL 249
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 133 bits (322), Expect = 2e-31
Identities = 61/85 (71%), Positives = 75/85 (88%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 130 bits (314), Expect = 2e-30
Identities = 60/85 (70%), Positives = 74/85 (87%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLL 182
IAP V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKV AS ATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 183 NMLNISPFSYGLVVKQVYDSGTIFH 257
NMLNISPFS+GLV++QV+D+G+I++
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYN 200
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 199 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 249
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 68.1 bits (159), Expect = 1e-11
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 122
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 308 GVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVL 187
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 68.1 bits (159), Expect = 1e-11
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 3 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 122
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 115 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 308 GVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVL 186
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 63.7 bits (148), Expect = 3e-10
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +3
Query: 141 KPGDKVRASAATLLNMLNISPFSYGLVVKQVYDSGTIFH 257
K GDKV AS ATLLNMLNISPFS+GLV++QV+D+G+I++
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYN 40
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 251 FSPELLDIKPEDLRAKFQAGVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
++PE+LDI E L ++F GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 39 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVL 89
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 308 GVANVAALSLAXGXPTIA*APHSIANGFKNLL 403
GV NVA++ L G PT+A PHSI NG+K +L
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVL 32
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 1 PLPHCQS--SFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRFELLQ 171
P+ H S S P TP + P S S +K++T Y + S P T
Sbjct: 276 PVTHTTSATSSRPPTPITTHSSPTRSSPLSSTGPMTATSIKTTTTYPTPSHPQTTLTTHV 335
Query: 172 PPFSTC*TSLHSHMVLS 222
PPFST + +H V++
Sbjct: 336 PPFSTSSVTPSTHTVIT 352
>AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING
domain 1 variant protein.
Length = 777
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 39 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLLNMLN 194
+GL E+ L++ K K T H++ PGD V+++ +L +LN
Sbjct: 575 SGLSSEQQKMLSGLAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN 626
>U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING domain
protein protein.
Length = 777
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 39 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLLNMLN 194
+GL E+ L++ K K T H++ PGD V+++ +L +LN
Sbjct: 575 SGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN 626
>BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 39 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLLNMLN 194
+GL E+ L++ K K T H++ PGD V+++ +L +LN
Sbjct: 575 SGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN 626
>BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 39 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLLNMLN 194
+GL E+ L++ K K T H++ PGD V+++ +L +LN
Sbjct: 575 SGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN 626
>AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING
domain protein protein.
Length = 777
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 39 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLLNMLN 194
+GL E+ L++ K K T H++ PGD V+++ +L +LN
Sbjct: 575 SGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN 626
>AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein.
Length = 777
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 39 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVRASAATLLNMLN 194
+GL E+ L++ K K T H++ PGD V+++ +L +LN
Sbjct: 575 SGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN 626
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,197,965
Number of Sequences: 237096
Number of extensions: 1426022
Number of successful extensions: 3202
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3200
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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