Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40392
(613 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075558-1|AAL68365.1| 445|Drosophila melanogaster RH63796p pro... 76 4e-14
AY070645-1|AAL48116.1| 445|Drosophila melanogaster RH02901p pro... 76 4e-14
AE014134-606|AAF51105.1| 445|Drosophila melanogaster CG3246-PA ... 76 4e-14
AY113548-1|AAM29553.1| 246|Drosophila melanogaster RE70318p pro... 37 0.019
AE014297-175|AAF52076.1| 246|Drosophila melanogaster CG1124-PA ... 37 0.019
AE013599-869|AAF58935.1| 254|Drosophila melanogaster CG13953-PA... 30 2.1
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA... 30 2.8
AY061453-1|AAL29001.1| 985|Drosophila melanogaster LD39136p pro... 29 3.7
AE013599-1040|AAF58831.2| 985|Drosophila melanogaster CG18011-P... 29 3.7
X55702-1|CAA39229.1| 390|Drosophila melanogaster polycomb prote... 29 6.5
AY071619-1|AAL49241.1| 390|Drosophila melanogaster RE66837p pro... 29 6.5
AE014296-3518|AAF51707.1| 390|Drosophila melanogaster CG32443-P... 29 6.5
AY122247-1|AAM52759.1| 896|Drosophila melanogaster SD04548p pro... 28 8.6
AY061495-1|AAL29043.1| 592|Drosophila melanogaster LD45751p pro... 28 8.6
AL021728-6|CAA16814.1| 591|Drosophila melanogaster EG:95B7.6 pr... 28 8.6
AF170448-1|AAD50986.1| 591|Drosophila melanogaster zeste-white ... 28 8.6
AE014298-457|AAF45819.2| 592|Drosophila melanogaster CG2711-PA ... 28 8.6
AE014297-2941|AAF55858.2| 896|Drosophila melanogaster CG5798-PA... 28 8.6
>AY075558-1|AAL68365.1| 445|Drosophila melanogaster RH63796p
protein.
Length = 445
Score = 75.8 bits (178), Expect = 4e-14
Identities = 29/84 (34%), Positives = 55/84 (65%)
Frame = +3
Query: 3 ILEHYKQPDPTGLPGAKLPDPYPVPDVKQSLTLGTMNFKNIALYGTNEFRLNYVKADIGA 182
+L H++Q DP GLPG +PDP VP+VK+S+ + ++ K + YG ++FR++ + D+
Sbjct: 56 MLVHFQQEDPQGLPGVPVPDPLEVPNVKKSMGMANLDMKQVKAYGLSKFRIDKMNLDLKE 115
Query: 183 MEAHAVMTLEKLQARGNYTFATWF 254
M + + L+++ +G YT +++F
Sbjct: 116 MRFNGGLQLDQMLVKGQYTLSSFF 139
Score = 56.0 bits (129), Expect = 4e-08
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 RSNGGPRRDDSRKIASTRQLHLRDVVHSVRGPFTVHITGLRVTANARLQVERDGKIRAEN 355
R NGG + D ++ Q L GPFTV + + A A L VERDG++ +
Sbjct: 117 RFNGGLQLD---QMLVKGQYTLSSFFSKANGPFTVVLKNVYAEATALLAVERDGQLATDR 173
Query: 356 IVMDLSASNIAVNLEN----AEIISGFINTIGPFIFDSIKPYVLKEA 484
I +D++ S++ ++ +N + +N +FD++KP++L+EA
Sbjct: 174 IKIDITFSDMTMDFQNLGLVGSVFQSVVNGAPNLVFDAMKPFMLQEA 220
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 517 IDEVAGDLQFPNSISPLDMVIADVRKKVHPNG 612
I + G+ + PNSI+PLD IA RK V G
Sbjct: 232 IQKTLGERRLPNSITPLDSAIAMARKMVRQKG 263
>AY070645-1|AAL48116.1| 445|Drosophila melanogaster RH02901p
protein.
Length = 445
Score = 75.8 bits (178), Expect = 4e-14
Identities = 29/84 (34%), Positives = 55/84 (65%)
Frame = +3
Query: 3 ILEHYKQPDPTGLPGAKLPDPYPVPDVKQSLTLGTMNFKNIALYGTNEFRLNYVKADIGA 182
+L H++Q DP GLPG +PDP VP+VK+S+ + ++ K + YG ++FR++ + D+
Sbjct: 56 MLVHFQQEDPQGLPGVPVPDPLEVPNVKKSMGMANLDMKQVKAYGLSKFRIDKMNLDLKE 115
Query: 183 MEAHAVMTLEKLQARGNYTFATWF 254
M + + L+++ +G YT +++F
Sbjct: 116 MRFNGGLQLDQMLVKGQYTLSSFF 139
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 RSNGGPRRDDSRKIASTRQLHLRDVVHSVRGPFTVHITGLRVTANARLQVERDGKIRAEN 355
R NGG + D ++ Q L GPFTV + + A A L VERDG++ +
Sbjct: 117 RFNGGLQLD---QMLVKGQYTLSSFFSKANGPFTVVLKNVYAEATAFLAVERDGQLATDR 173
Query: 356 IVMDLSASNIAVNLEN----AEIISGFINTIGPFIFDSIKPYVLKEA 484
I +D++ S++ ++ +N + +N +FD++KP++L+EA
Sbjct: 174 IKIDITFSDMTMDFQNLGLVGSVFQSVVNGAPNLVFDAMKPFMLQEA 220
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 517 IDEVAGDLQFPNSISPLDMVIADVRKKVHPNG 612
I + G+ + PNSI+PLD IA RK V G
Sbjct: 232 IQKTLGERRLPNSITPLDSAIAMARKMVRQKG 263
>AE014134-606|AAF51105.1| 445|Drosophila melanogaster CG3246-PA
protein.
Length = 445
Score = 75.8 bits (178), Expect = 4e-14
Identities = 29/84 (34%), Positives = 55/84 (65%)
Frame = +3
Query: 3 ILEHYKQPDPTGLPGAKLPDPYPVPDVKQSLTLGTMNFKNIALYGTNEFRLNYVKADIGA 182
+L H++Q DP GLPG +PDP VP+VK+S+ + ++ K + YG ++FR++ + D+
Sbjct: 56 MLVHFQQEDPQGLPGVPVPDPLEVPNVKKSMGMANLDMKQVKAYGLSKFRIDKMNLDLKE 115
Query: 183 MEAHAVMTLEKLQARGNYTFATWF 254
M + + L+++ +G YT +++F
Sbjct: 116 MRFNGGLQLDQMLVKGQYTLSSFF 139
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 RSNGGPRRDDSRKIASTRQLHLRDVVHSVRGPFTVHITGLRVTANARLQVERDGKIRAEN 355
R NGG + D ++ Q L GPFTV + + A A L VERDG++ +
Sbjct: 117 RFNGGLQLD---QMLVKGQYTLSSFFSKANGPFTVVLKNVYAEATAFLAVERDGQLATDR 173
Query: 356 IVMDLSASNIAVNLEN----AEIISGFINTIGPFIFDSIKPYVLKEA 484
I +D++ S++ ++ +N + +N +FD++KP++L+EA
Sbjct: 174 IKIDITFSDMTMDFQNLGLVGSVFQSVVNGAPNLVFDAMKPFMLQEA 220
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 517 IDEVAGDLQFPNSISPLDMVIADVRKKVHPNG 612
I + G+ + PNSI+PLD IA RK V G
Sbjct: 232 IQKTLGERRLPNSITPLDSAIAMARKMVRQKG 263
>AY113548-1|AAM29553.1| 246|Drosophila melanogaster RE70318p
protein.
Length = 246
Score = 37.1 bits (82), Expect = 0.019
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +3
Query: 6 LEHYKQPDPTGLPGAKLP--DPYPVPDVKQSLTLGTMNFK----NIALYGTNEFRLNYVK 167
+EH K G+P +LP +P+ + + LT G +K N+ +G + F++ +K
Sbjct: 43 IEHLKPYLANGIPDIQLPSVEPFKMDTLALQLTEGPQGYKITLKNMEAFGASNFKVTSLK 102
Query: 168 ADIGAMEAHAVMTLEKLQARGNYT 239
G+ A + + KL+ YT
Sbjct: 103 LSEGSEPFKAKIVMPKLKIEAKYT 126
>AE014297-175|AAF52076.1| 246|Drosophila melanogaster CG1124-PA
protein.
Length = 246
Score = 37.1 bits (82), Expect = 0.019
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +3
Query: 6 LEHYKQPDPTGLPGAKLP--DPYPVPDVKQSLTLGTMNFK----NIALYGTNEFRLNYVK 167
+EH K G+P +LP +P+ + + LT G +K N+ +G + F++ +K
Sbjct: 43 IEHLKPYLANGIPDIQLPSVEPFKMDTLALQLTEGPQGYKITLKNMEAFGASNFKVTSLK 102
Query: 168 ADIGAMEAHAVMTLEKLQARGNYT 239
G+ A + + KL+ YT
Sbjct: 103 LSEGSEPFKAKIVMPKLKIEAKYT 126
>AE013599-869|AAF58935.1| 254|Drosophila melanogaster CG13953-PA
protein.
Length = 254
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 352 KHRHGLIGQQHRCEPGKRRNHLRIYQHHRTVHLRFDQTLRPQGSLCHHQNH 504
+ H L QQH + ++ +H + HH+ + L + SL HH +H
Sbjct: 173 QQHHHLQQQQHLQQQQQQHHHHHHHHHHQQLSLHQNHLYFSGASLGHHHHH 223
>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
protein.
Length = 1218
Score = 29.9 bits (64), Expect = 2.8
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +1
Query: 223 HAATTPSRRGSFGSGPVHCSHNRTEGDSEXXXXXXXXXXNQSGKHRHGLIGQQHRCEPGK 402
HA PS+ G G GP H H SG HG GQ H +P +
Sbjct: 435 HAHGPPSQGGPGGPGPPHGGH------PHHPHHGGAGSGGGSGPGSHG--GQPHHQKPRR 486
Query: 403 RRN-HLRIYQHHRTVHLRFDQTLRPQGSLCHH 495
+ +R R +H FD P G LC++
Sbjct: 487 TASQRIRAATAARKLHFVFD----PAGRLCYY 514
>AY061453-1|AAL29001.1| 985|Drosophila melanogaster LD39136p
protein.
Length = 985
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 346 SGKHRHGLIGQQHRCEP-GKRRNHLRIYQHH--RTVHLRFDQTLRPQGSLCHHQNHDDEK 516
SG H+ G+ C+P GK H+++Y+HH LR D T R + +C + D E
Sbjct: 634 SGVHKDGVF----LCQPCGKEFPHMKLYRHHLRNYQQLRSDSTHR-RLEICVYYMCDQEN 688
Query: 517 IDE 525
E
Sbjct: 689 CTE 691
>AE013599-1040|AAF58831.2| 985|Drosophila melanogaster CG18011-PA
protein.
Length = 985
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 346 SGKHRHGLIGQQHRCEP-GKRRNHLRIYQHH--RTVHLRFDQTLRPQGSLCHHQNHDDEK 516
SG H+ G+ C+P GK H+++Y+HH LR D T R + +C + D E
Sbjct: 634 SGVHKDGVF----LCQPCGKEFPHMKLYRHHLRNYQQLRSDSTHR-RLEICVYYMCDQEN 688
Query: 517 IDE 525
E
Sbjct: 689 CTE 691
>X55702-1|CAA39229.1| 390|Drosophila melanogaster polycomb protein
protein.
Length = 390
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/90 (21%), Positives = 30/90 (33%)
Frame = +1
Query: 235 TPSRRGSFGSGPVHCSHNRTEGDSEXXXXXXXXXXNQSGKHRHGLIGQQHRCEPGKRRNH 414
TPS+RG + + + E N H+ H E K + H
Sbjct: 81 TPSKRG------IKKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKH 134
Query: 415 LRIYQHHRTVHLRFDQTLRPQGSLCHHQNH 504
+ HH + + R + L HH +H
Sbjct: 135 HHHHHHHHHIKSERNSGRRSESPLTHHHHH 164
>AY071619-1|AAL49241.1| 390|Drosophila melanogaster RE66837p
protein.
Length = 390
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/90 (21%), Positives = 30/90 (33%)
Frame = +1
Query: 235 TPSRRGSFGSGPVHCSHNRTEGDSEXXXXXXXXXXNQSGKHRHGLIGQQHRCEPGKRRNH 414
TPS+RG + + + E N H+ H E K + H
Sbjct: 81 TPSKRG------IKKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKH 134
Query: 415 LRIYQHHRTVHLRFDQTLRPQGSLCHHQNH 504
+ HH + + R + L HH +H
Sbjct: 135 HHHHHHHHHIKSERNSGRRSESPLTHHHHH 164
>AE014296-3518|AAF51707.1| 390|Drosophila melanogaster CG32443-PA
protein.
Length = 390
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/90 (21%), Positives = 30/90 (33%)
Frame = +1
Query: 235 TPSRRGSFGSGPVHCSHNRTEGDSEXXXXXXXXXXNQSGKHRHGLIGQQHRCEPGKRRNH 414
TPS+RG + + + E N H+ H E K + H
Sbjct: 81 TPSKRG------IKKKEKEPDPEPESEEDEYTFTENDVDTHQATTSSATHDKESKKEKKH 134
Query: 415 LRIYQHHRTVHLRFDQTLRPQGSLCHHQNH 504
+ HH + + R + L HH +H
Sbjct: 135 HHHHHHHHHIKSERNSGRRSESPLTHHHHH 164
>AY122247-1|AAM52759.1| 896|Drosophila melanogaster SD04548p
protein.
Length = 896
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 9 EHYKQPDPTG--LPGAKLPDPYPVPDVKQSL 95
+HYK P P+G PG L D + V D +SL
Sbjct: 478 KHYKSPTPSGPPSPGRNLEDVHVVSDSLESL 508
>AY061495-1|AAL29043.1| 592|Drosophila melanogaster LD45751p
protein.
Length = 592
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 376 QQHRCEP-GKRRNHLRIYQHHRTVH 447
+Q+ CE GKR HLR Y+ H H
Sbjct: 331 KQYECEECGKRLKHLRNYKEHMLTH 355
>AL021728-6|CAA16814.1| 591|Drosophila melanogaster EG:95B7.6
protein.
Length = 591
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 376 QQHRCEP-GKRRNHLRIYQHHRTVH 447
+Q+ CE GKR HLR Y+ H H
Sbjct: 330 KQYECEECGKRLKHLRNYKEHMLTH 354
>AF170448-1|AAD50986.1| 591|Drosophila melanogaster zeste-white 5
protein.
Length = 591
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 376 QQHRCEP-GKRRNHLRIYQHHRTVH 447
+Q+ CE GKR HLR Y+ H H
Sbjct: 330 KQYECEECGKRLKHLRNYKEHMLTH 354
>AE014298-457|AAF45819.2| 592|Drosophila melanogaster CG2711-PA
protein.
Length = 592
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 376 QQHRCEP-GKRRNHLRIYQHHRTVH 447
+Q+ CE GKR HLR Y+ H H
Sbjct: 331 KQYECEECGKRLKHLRNYKEHMLTH 355
>AE014297-2941|AAF55858.2| 896|Drosophila melanogaster CG5798-PA
protein.
Length = 896
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 9 EHYKQPDPTG--LPGAKLPDPYPVPDVKQSL 95
+HYK P P+G PG L D + V D +SL
Sbjct: 478 KHYKSPTPSGPPSPGRNLEDVHVVSDSLESL 508
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,669,586
Number of Sequences: 53049
Number of extensions: 594811
Number of successful extensions: 2051
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2041
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -