Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40390
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U78310-1|AAB61140.1|  588|Homo sapiens pescadillo protein.             97   3e-20
CR456539-1|CAG30425.1|  583|Homo sapiens PES1 protein.                 97   3e-20
BC032489-1|AAH32489.1|  588|Homo sapiens pescadillo homolog 1, c...    97   3e-20

>U78310-1|AAB61140.1|  588|Homo sapiens pescadillo protein.
          Length = 588

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = +2

Query: 254 NRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKMRKFLR 433
           ++K+  KG+   +T Y  KDI+FLLHEPI+ K RE KV+ +K+R+A  + E+  + +   
Sbjct: 50  HKKKVNKGSTAARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKD 109

Query: 434 DYPEINIDHIVKERYPTFVDALRDL-MIVSHCASYSVLSHH*KKFQETNHSC 586
           + P   +DHI+KERYPTF+DALRDL   +S C  +S      K   +T   C
Sbjct: 110 NKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLC 161



 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = +1

Query: 508 DDCLTLCFLFSTFPSLKKVPRDQSFLCRRLTVEFMHAVIAA 630
           DD L++CFLFSTFP   K       LCRRLTVEFMH +IAA
Sbjct: 135 DDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAA 175



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +3

Query: 132 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPREPRTERGLKKVQAESKHFITLK 311
           Y  G    ++TR            DFRR+CILKGIYP EP+ ++ + K    ++ F  +K
Sbjct: 9   YERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTAARTFYLIK 68


>CR456539-1|CAG30425.1|  583|Homo sapiens PES1 protein.
          Length = 583

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = +2

Query: 254 NRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKMRKFLR 433
           ++K+  KG+   +T Y  KDI+FLLHEPI+ K RE KV+ +K+R+A  + E+  + +   
Sbjct: 50  HKKKVNKGSTAARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKD 109

Query: 434 DYPEINIDHIVKERYPTFVDALRDL-MIVSHCASYSVLSHH*KKFQETNHSC 586
           + P   +DHI+KERYPTF+DALRDL   +S C  +S      K   +T   C
Sbjct: 110 NKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLC 161



 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = +1

Query: 508 DDCLTLCFLFSTFPSLKKVPRDQSFLCRRLTVEFMHAVIAA 630
           DD L++CFLFSTFP   K       LCRRLTVEFMH +IAA
Sbjct: 135 DDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAA 175



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +3

Query: 132 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPREPRTERGLKKVQAESKHFITLK 311
           Y  G    ++TR            DFRR+CILKGIYP EP+ ++ + K    ++ F  +K
Sbjct: 9   YERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTAARTFYLIK 68


>BC032489-1|AAH32489.1|  588|Homo sapiens pescadillo homolog 1,
           containing BRCT domain (zebrafish) protein.
          Length = 588

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = +2

Query: 254 NRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKMRKFLR 433
           ++K+  KG+   +T Y  KDI+FLLHEPI+ K RE KV+ +K+R+A  + E+  + +   
Sbjct: 50  HKKKVNKGSTAARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKD 109

Query: 434 DYPEINIDHIVKERYPTFVDALRDL-MIVSHCASYSVLSHH*KKFQETNHSC 586
           + P   +DHI+KERYPTF+DALRDL   +S C  +S      K   +T   C
Sbjct: 110 NKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLC 161



 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = +1

Query: 508 DDCLTLCFLFSTFPSLKKVPRDQSFLCRRLTVEFMHAVIAA 630
           DD L++CFLFSTFP   K       LCRRLTVEFMH +IAA
Sbjct: 135 DDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAA 175



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +3

Query: 132 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPREPRTERGLKKVQAESKHFITLK 311
           Y  G    ++TR            DFRR+CILKGIYP EP+ ++ + K    ++ F  +K
Sbjct: 9   YERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTAARTFYLIK 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,409,704
Number of Sequences: 237096
Number of extensions: 1899828
Number of successful extensions: 3539
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3539
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)