Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40387
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    31   1.2  
AY071194-1|AAL48816.1|  391|Drosophila melanogaster RE24196p pro...    29   4.8  
AE014297-146|AAF52098.2|  612|Drosophila melanogaster CG31530-PA...    29   4.8  
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    29   6.4  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    29   6.4  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    29   6.4  

>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 62  PKTNGSFTVVTVAHRHLQRKCATHLEI*VLRSQYSYNGCPTL 187
           P     F ++  AH HLQ KC    E+     + ++NG P+L
Sbjct: 222 PSVAQRFLILIFAHEHLQWKCVAEFEL--CLEEIAFNGTPSL 261


>AY071194-1|AAL48816.1|  391|Drosophila melanogaster RE24196p
           protein.
          Length = 391

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 3/24 (12%)
 Frame = -1

Query: 537 MEHKGYAPTKKT---NSTVVKTHT 475
           M++KGY+PT KT   NST++K +T
Sbjct: 343 MDNKGYSPTSKTIHSNSTILKLNT 366


>AE014297-146|AAF52098.2|  612|Drosophila melanogaster CG31530-PA
           protein.
          Length = 612

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 3/24 (12%)
 Frame = -1

Query: 537 MEHKGYAPTKKT---NSTVVKTHT 475
           M++KGY+PT KT   NST++K +T
Sbjct: 564 MDNKGYSPTSKTIHSNSTILKLNT 587


>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 62  PKTNGSFTVVTVAHRHLQRKCATHLEI*VLRSQYSYNGCPTL 187
           P       ++  AH HLQ KC    E+     + ++NG P+L
Sbjct: 38  PSVAQRLLILIFAHEHLQWKCVAEFEL--CLEEIAFNGTPSL 77


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 62  PKTNGSFTVVTVAHRHLQRKCATHLEI*VLRSQYSYNGCPTL 187
           P       ++  AH HLQ KC    E+     + ++NG P+L
Sbjct: 38  PSVAQRLLILIFAHEHLQWKCVAEFEL--CLEEIAFNGTPSL 77


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 62  PKTNGSFTVVTVAHRHLQRKCATHLEI*VLRSQYSYNGCPTL 187
           P       ++  AH HLQ KC    E+     + ++NG P+L
Sbjct: 260 PSVAQRLLILIFAHEHLQWKCVAEFEL--CLEEIAFNGTPSL 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,972,677
Number of Sequences: 53049
Number of extensions: 692704
Number of successful extensions: 1301
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)