Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40384
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 33 0.16
06_03_0988 + 26642247-26642506,26642790-26642872,26643150-266432... 33 0.21
10_01_0078 - 1012031-1012084,1012998-1013105,1013610-1013661,101... 33 0.28
01_06_0710 + 31384519-31385493 31 0.64
10_01_0159 - 1807806-1809386 31 0.84
04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348 31 0.84
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 30 1.5
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 30 1.5
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 30 2.0
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 29 2.6
03_05_0713 - 27070063-27070126,27070202-27070290,27070369-270704... 29 2.6
02_01_0773 - 5760034-5760386,5760889-5760925,5761069-5761225,576... 29 2.6
01_06_1638 + 38812226-38812660,38812989-38813063,38813180-388132... 29 2.6
05_04_0300 - 19969066-19969535,19971216-19972686 29 3.4
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 29 3.4
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 29 4.5
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 29 4.5
01_01_0889 + 7008077-7009261 29 4.5
01_01_0657 + 5015435-5016292,5016352-5016657 29 4.5
10_01_0243 + 2538994-2539193,2539297-2539471,2539568-2539726,254... 28 6.0
04_03_0572 + 17310729-17310746,17312209-17312902,17312991-173134... 28 6.0
01_01_0238 - 1976645-1977561,1977649-1977909,1978243-1978275,198... 28 6.0
11_01_0439 + 3353516-3353962,3354403-3354483,3354675-3354947,335... 28 7.9
09_06_0046 + 20467240-20467586,20467627-20468116,20468815-20469426 28 7.9
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 28 7.9
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 28 7.9
07_03_1473 + 26756338-26757583,26759067-26759472,26760867-267609... 28 7.9
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 28 7.9
04_03_0501 + 16593710-16593886,16595255-16595311,16595748-165974... 28 7.9
02_02_0457 + 10503801-10507358 28 7.9
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/70 (37%), Positives = 35/70 (50%)
Frame = +1
Query: 370 GTRNVRATFRRSARQAAPRRGSDAART*SICRFGQAARAIPHSHREDEPQTVPSAASTPP 549
G R RA RR RQ APRR A+ ++ R+G A RA S R T+ ++ P
Sbjct: 99 GFRLRRARLRR--RQEAPRRAGGASTAAAVRRWGSARRAGRQSTRPPH-STLLDSSVFPL 155
Query: 550 LSPIDMDTQE 579
+ PI T+E
Sbjct: 156 IVPIPWITEE 165
>06_03_0988 +
26642247-26642506,26642790-26642872,26643150-26643238,
26643478-26643551,26643783-26643833,26644512-26644588,
26644694-26645313
Length = 417
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 295 SERYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRSARQAAP 423
S Y N PY+ +A + S S+ YGG+ T+ S AP
Sbjct: 365 SNSYSGNNIPYAAAAAMTSGSALYGGSTGSNGTWVASNTSTAP 407
>10_01_0078 -
1012031-1012084,1012998-1013105,1013610-1013661,
1013926-1016603
Length = 963
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/75 (33%), Positives = 30/75 (40%)
Frame = +1
Query: 328 SGSACLISRSSTYGGTRNVRATFRRSARQAAPRRGSDAART*SICRFGQAARAIPHSHRE 507
S A L++R G R RA R A AP A R G + A+ H HR
Sbjct: 14 SHCADLLTRLLRRGRLREARAVASRLALADAPDPAVSDALVACHSRLGDISSALSHFHRL 73
Query: 508 DEPQTVPSAASTPPL 552
+ PS AST L
Sbjct: 74 VQSGAAPSPASTAAL 88
>01_06_0710 + 31384519-31385493
Length = 324
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 523 VPSAASTPPLSPIDMDTQEKIKLERKRQRN 612
VP+ +TPPL P D D +++ + R+R+R+
Sbjct: 177 VPALKTTPPLLPSDTDEEKRPRSRRRRRRS 206
>10_01_0159 - 1807806-1809386
Length = 526
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 574 ECPCRWVTAAACWPRSAP 521
ECP +WV A AC P S P
Sbjct: 411 ECPAKWVRAMACSPSSVP 428
>04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348
Length = 662
Score = 31.1 bits (67), Expect = 0.84
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Frame = +3
Query: 78 RCKHMVRNSGHSMETTFYDEQYP--------LSGPVEN---LKRPLTLDVGRGGKRSRIA 224
+ KH SGH ++ F + P LS P N LK+ +TL + R + +A
Sbjct: 381 KIKHFKEESGHIIQEYFLSDDVPELIISLQELSAPEYNPIFLKKLITLAMDRKNREKEMA 440
Query: 225 APVLSSPDLQC*SSD 269
+ +LSS L+ S+D
Sbjct: 441 SALLSSLSLELFSTD 455
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 481 RAIPHSHREDEPQTVPSAASTPPLSP 558
RA H HR P T PSAA+T P P
Sbjct: 99 RAQRHLHRPATPSTEPSAAATEPYRP 124
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 514 PQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEE 672
P PS +S PP PI++ +E+ + E + V + + E + ++E+
Sbjct: 60 PVQFPSPSSPPPSPPIEISDEEEAEAEVVVEEEEVVVVEDEEEEYEEVEEIED 112
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 529 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASK 630
S+AS PP P ++ + K+K+E+K +N + + K
Sbjct: 174 SSASVPPERPRALEKKPKLKIEQKEHQNLIQSVK 207
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 463 RFGQAARAIPHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRR 642
R ++A + S E E ++ S S S D + + + + R+R++ R + RRR
Sbjct: 93 RRSRSASSGSSSESESESESSYSDCSAGSESETDSEEERRRRRRRRRRKEREEEERRRRR 152
Query: 643 KLERISKLEEK 675
K + K +EK
Sbjct: 153 KDKERRKRKEK 163
>03_05_0713 -
27070063-27070126,27070202-27070290,27070369-27070428,
27071110-27071215,27071309-27071428,27072340-27072476,
27072561-27072647,27073660-27073956
Length = 319
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -1
Query: 289 QFFQLRRSELQHCKSGEERTGAAIRERFPPRPTSKVRGLLRFSTGPLRGYCSS*KVVS 116
Q F R S+ Q+C + E+ T A R PR GL+ + G LR C KV S
Sbjct: 206 QDFLSRESKCQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWANKGTLRN-CPKAKVES 262
>02_01_0773 -
5760034-5760386,5760889-5760925,5761069-5761225,
5762584-5762773,5762873-5763154,5763582-5763645
Length = 360
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 469 GQAARAIPHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKL 648
G+AA + T ++A SP D +E +L+R RNRV+A + R RK
Sbjct: 140 GRAAGGGGGGAERAQSSTAQASARRRGRSPAD---KEHKRLKRLL-RNRVSAQQARERKK 195
Query: 649 ERISKLEEKVK 681
++ LE KVK
Sbjct: 196 AYLNDLEVKVK 206
>01_06_1638 +
38812226-38812660,38812989-38813063,38813180-38813284,
38813387-38813472,38813554-38813674,38813761-38813840,
38814005-38814067,38814205-38814326,38814429-38814514,
38814626-38814750,38814883-38814911,38815188-38815333,
38815643-38815822,38816445-38816585
Length = 597
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +1
Query: 331 GSACLISRSSTYGGTRNVRATFRRSARQAAPRRGSDAART*SICRFGQAARAIPHSHRED 510
G +C+ + TY N + ++ A R D IC A RA+ D
Sbjct: 448 GLSCMNAFLCTYHCEANASLSVKKKPELALTRLEEDDTTYRQICAGAAAVRAMEEGRGGD 507
Query: 511 EPQTVPSAASTPPLS---PIDMDTQEKIKLERKR 603
P + SAA+ ++ P ++ Q+ +L R+R
Sbjct: 508 PPSSSSSAAAAAGVAIGYPF-LEPQQGARLRRRR 540
>05_04_0300 - 19969066-19969535,19971216-19972686
Length = 646
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 568 DTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+ +E + + RNR +A R+RK + +LEEKVK
Sbjct: 168 EEEEDERRAARLMRNRESAQLSRQRKKRYVEELEEKVK 205
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 91 WFGIPATAWRPPSMTSNILSAALWKTLKGP*PWMLG-GVGNVHESLHPFSPRQIY 252
WF ++ W PSM N+L + + P +LG +H L PFS ++Y
Sbjct: 1806 WFERDSSLWMLPSMNDNLLDHLKGRGV-STIPALLGLSREELHRLLQPFSASELY 1859
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 397 RRSARQAAPRRG--SDAART*SICRFGQAARAIPHSHRED-EPQTVPSAAST-PPLSPID 564
R SA AP +G +T +F ++ +A ED +P +V S AS PP P+
Sbjct: 513 RPSAAATAPGKGLGMKLGKTQKTNQFLESLKAEGEVILEDVQPSSVQSRASPLPPSDPVT 572
Query: 565 MDTQEKIKLERKR 603
+ +EK+ + KR
Sbjct: 573 VTIEEKLNVTVKR 585
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/89 (28%), Positives = 41/89 (46%)
Frame = +1
Query: 349 SRSSTYGGTRNVRATFRRSARQAAPRRGSDAART*SICRFGQAARAIPHSHREDEPQTVP 528
+R++ G R + RR+A A RR +R+ S R +AAR S R +
Sbjct: 55 ARAAERVGEEAPRGSGRRAAPVVASRRRRRRSRSRS--RSPRAARPRAESSRRPTARRAR 112
Query: 529 SAASTPPLSPIDMDTQEKIKLERKRQRNR 615
+ A +P L ID+D+ + R ++ R
Sbjct: 113 ARARSPSLEIIDVDSGSDRGVVRVKEEPR 141
>01_01_0889 + 7008077-7009261
Length = 394
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 502 REDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLER--ISKLEEK 675
++ P T S A+ PP P T+ +I+ +R+ R C R R +S EE+
Sbjct: 265 KKKSPSTASSKAAPPPPPPPPPTTRHQIRRKRRAARASSCVDTCGVRDGFRPVVSAAEEQ 324
Query: 676 VK 681
V+
Sbjct: 325 VR 326
>01_01_0657 + 5015435-5016292,5016352-5016657
Length = 387
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +2
Query: 194 WAGWETFTNRCTRSLLARFTMLKLGSPELEKLIIQNGMVXXXXXXXXXXVLFPAVAP-TE 370
WA W + + A T +PE++ + +Q V +F A P +
Sbjct: 108 WASWPQQPAQTVDDVAAAATTTPQAAPEIQTMSLQPAAVAGFDPERIPKSIFQAKPPGSS 167
Query: 371 EQEMYARPFVEALDKLHHG 427
Q ++ E+L +HHG
Sbjct: 168 SQAEWSVASNESLFSIHHG 186
>10_01_0243 +
2538994-2539193,2539297-2539471,2539568-2539726,
2540109-2540205,2540420-2540490,2541196-2541247,
2541778-2541826,2541965-2542102,2542653-2542772,
2542861-2542990
Length = 396
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 125 GGLHAVAGIPNHVFAPNASVSLNSL 51
GGLH + G+P+H+ A S+ SL
Sbjct: 80 GGLHHMLGLPDHILIAAAGDSIESL 104
>04_03_0572 +
17310729-17310746,17312209-17312902,17312991-17313400,
17325755-17326063
Length = 476
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 123 TFYDEQYPLS--GPVENLKRPLTLDVGRGGKRSRIAAPV 233
T Y PL P + RPL D+G GGKR + P+
Sbjct: 378 TSYCRNQPLRLLSPPPHPSRPLQPDLGEGGKRKGVGKPL 416
>01_01_0238 -
1976645-1977561,1977649-1977909,1978243-1978275,
1980556-1981345
Length = 666
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 244 GEERTGAAIRERFPPRPTSKVRGLLRFSTGPLRGYCSS*KVVS 116
G GA I +++ P S VRG + P+RGY K VS
Sbjct: 155 GNRTMGAYISDKWNSTPPSGVRGNCNSVSVPVRGYYDGMKPVS 197
>11_01_0439 +
3353516-3353962,3354403-3354483,3354675-3354947,
3355081-3355212,3355303-3355476,3355568-3355702,
3355746-3355797,3355954-3356093,3356574-3356705,
3356787-3356921,3356995-3357201,3357779-3357943
Length = 690
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -3
Query: 512 SSSRWEWGIALAACPNRHILYVRAASLPRRGAACLALRRKVARTFL 375
+ +R EW IAL AC + I V S GA C +L T +
Sbjct: 138 ADTRAEWQIALQACFRQSITVVTIYSSLGEGALCHSLNETEVTTVI 183
>09_06_0046 + 20467240-20467586,20467627-20468116,20468815-20469426
Length = 482
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 364 YGGTRNVRATFRRSARQAAPRRGSDAART*SIC-RFGQAARAI 489
YGG RN+ +R S+ AAP R ++AA + R +AARA+
Sbjct: 111 YGG-RNISWPWRTSSPLAAPARAAEAAALVARARRAAEAARAV 152
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 87 HMVRNSGHSMETTFYDEQYPLSGPVENLKRPLTL-----DVGRGG 206
++V N+ E T D+Q PLSGP + R + D+G+GG
Sbjct: 135 NIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGG 179
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 469 GQAARAIPHS---HREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNR 615
G A+ AIP S H++ P +S PP P+ +T K K ++ +Q++R
Sbjct: 1682 GPASSAIPSSQSQHKQQHPAQNSLDSSVPPNQPV--NTSHKQKKQQGQQQSR 1731
>07_03_1473 +
26756338-26757583,26759067-26759472,26760867-26760930,
26760975-26761055,26763350-26763588,26763689-26763947,
26764359-26764538,26764937-26765092,26765174-26765350
Length = 935
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 577 EKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
++ K + RNR +A + R+RK + + +LE KVK
Sbjct: 110 DEAKRRARLVRNRESAHQSRQRKKQYVEELEGKVK 144
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 469 GQAARAIPHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 609
G +RA+P H PS+ PP P+ +D + ++ E+++ +
Sbjct: 489 GFTSRAMPGQHHG----MPPSSMKPPPQRPLSLDADDAVRTEKQKPK 531
>04_03_0501 +
16593710-16593886,16595255-16595311,16595748-16597469,
16599045-16599326,16599521-16599637,16599655-16600365
Length = 1021
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = +1
Query: 490 PHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLE 669
P R E P + P P+DMD EK L R R K +RK R +LE
Sbjct: 138 PRKLRPGEIDPNPESKPARP-DPVDMDEDEKEMLSEARARLANTRGKKAKRK-AREKQLE 195
Query: 670 E 672
E
Sbjct: 196 E 196
>02_02_0457 + 10503801-10507358
Length = 1185
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 557 PSTWTLKKRLNWRERDRGIG*PLPNVDDVSWN 652
P+ + L R WR +R + LPN+ D +N
Sbjct: 61 PAKYDLIDRAEWRSHERRVAELLPNLKDAMYN 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,526,012
Number of Sequences: 37544
Number of extensions: 466136
Number of successful extensions: 1690
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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