Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40384
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 40 0.002
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 40 0.002
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 40 0.002
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 40 0.002
Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical p... 34 0.11
Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding... 34 0.11
AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding... 34 0.11
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 31 0.76
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 31 0.76
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 31 0.76
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 31 0.76
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 31 0.76
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 31 0.76
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 31 0.76
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 31 0.76
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 31 1.0
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 31 1.0
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 31 1.0
U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protei... 30 1.3
U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protei... 30 1.3
U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protei... 30 1.3
AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical ... 30 1.8
AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical... 30 1.8
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 30 1.8
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.8
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 30 1.8
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 30 1.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 29 2.3
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 29 2.3
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.1
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 29 4.1
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 29 4.1
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 29 4.1
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 29 4.1
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 29 4.1
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 29 4.1
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 29 4.1
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 29 4.1
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.4
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 5.4
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 28 5.4
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 28 7.1
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 28 7.1
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 27 9.4
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 9.4
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 9.4
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 9.4
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 9.4
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/44 (59%), Positives = 37/44 (84%)
Frame = +1
Query: 547 PLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P++ + +D QEK KLERKR RNR AA+KCR++K++RI +LEE+V
Sbjct: 69 PINMMALDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 112
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +1
Query: 565 MDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
+D QEK KLERKR RNR AA+KCR++K++RI +LEE+V
Sbjct: 21 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 58
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +1
Query: 565 MDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
+D QEK KLERKR RNR AA+KCR++K++RI +LEE+V
Sbjct: 219 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 256
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +1
Query: 565 MDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
+D QEK KLERKR RNR AA+KCR++K++RI +LEE+V
Sbjct: 239 LDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQV 276
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = +1
Query: 529 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
S+A P +M+ + K ++RQRN+ AA++CR+R+++ + +L+++V
Sbjct: 10 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQV 59
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = +1
Query: 529 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
S+A P +M+ + K ++RQRN+ AA++CR+R+++ + +L+++V
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQV 195
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = +1
Query: 529 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
S+A P +M+ + K ++RQRN+ AA++CR+R+++ + +L+++V
Sbjct: 10 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQV 59
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = +1
Query: 529 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
S+A P +M+ + K ++RQRN+ AA++CR+R+++ + +L+++V
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRIDLMKELQDQV 195
>Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical
protein R74.3b protein.
Length = 287
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +1
Query: 571 TQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+QE+ K++R++ +NRVAA R +K ER +K+E+ ++
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMR 94
>Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical
protein R74.3a protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +1
Query: 571 TQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+QE+ K++R++ +NRVAA R +K ER +K+E+ ++
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMR 94
>AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding
protein processedisoform protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +1
Query: 571 TQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+QE+ K++R++ +NRVAA R +K ER +K+E+ ++
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMR 94
>AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding
protein unprocessedisoform protein.
Length = 287
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +1
Query: 571 TQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+QE+ K++R++ +NRVAA R +K ER +K+E+ ++
Sbjct: 59 SQEE-KMDRRKLKNRVAAQNARDKKKERSAKIEDVMR 94
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 556 PIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P+ + + K + + +NR AA +CRR+K E + LE +V
Sbjct: 237 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRV 277
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 556 PIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P+ + + K + + +NR AA +CRR+K E + LE +V
Sbjct: 262 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRV 302
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 556 PIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P+ + + K + + +NR AA +CRR+K E + LE +V
Sbjct: 245 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRV 285
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 556 PIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P+ + + K + + +NR AA +CRR+K E + LE +V
Sbjct: 258 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRV 298
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 556 PIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P+ + + K + + +NR AA +CRR+K E + LE +V
Sbjct: 256 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRV 296
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 544 PPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P P+ + +K R++ RN+ +A R+RK + I +LE++V
Sbjct: 272 PDFFPLTKAEERDLKRIRRKIRNKRSAQTSRKRKQDYIEQLEDRV 316
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 556 PIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P+ + + K + + +NR AA +CRR+K E + LE +V
Sbjct: 256 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRV 296
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 556 PIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
P+ + + K + + +NR AA +CRR+K E + LE +V
Sbjct: 237 PLHGEDESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRV 277
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 526 PSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLE 651
P A TPP++ + Q+K+K++ + ++ AS R R ++
Sbjct: 406 PKANRTPPMTSQQLHEQQKLKMQEEEMMSQTCASDFRVRPID 447
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 481 RAIPHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVA 621
R S +D+P T S+A PP SPI ++T E +E ++++ + +
Sbjct: 16 RTSSRSVADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKKTS 60
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 481 RAIPHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVA 621
R S +D+P T S+A PP SPI ++T E +E ++++ + +
Sbjct: 16 RTSSRSVADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKKTS 60
>U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protein
1, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 574 QEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
++ I+ R+R +N+VAA CR+R+ +R K+ +
Sbjct: 276 RQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSHYI 310
>U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protein
1, isoform c protein.
Length = 533
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 574 QEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
++ I+ R+R +N+VAA CR+R+ +R K+ +
Sbjct: 499 RQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSHYI 533
>U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protein
1, isoform a protein.
Length = 623
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 574 QEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
++ I+ R+R +N+VAA CR+R+ +R K+ +
Sbjct: 589 RQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSHYI 623
>AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical
protein Y116F11B.6 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 586 KLERKRQRNRVAASKCRRRKLERISKLE 669
K + KR+RNR+AA+K RR + E + K +
Sbjct: 133 KAKTKRERNRIAAAKSRRLEKELMRKTQ 160
>AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical
protein Y73F8A.35 protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 383 YARPFVEALDKLHHGEAVT 439
Y RPF AL++ HHGE +T
Sbjct: 314 YMRPFQNALERPHHGEFIT 332
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 562 DMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+ D +EK KLE+K++ K K +++ + EEK+K
Sbjct: 206 EKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLK 245
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 562 DMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+ D +EK KLE+K++ K K +++ + EEK+K
Sbjct: 242 EKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLK 281
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 562 DMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+ D +EK KLE+K++ K K +++ + EEK+K
Sbjct: 242 EKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLK 281
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 427 RGSDAART*SICRFGQAARAIPHSHREDEPQTVPSAASTPP 549
+G D A+T R AAR H HR+++ Q +P S P
Sbjct: 560 KGKDHAKTCKRIRTVFAARLQNHHHRDEKAQPIPRYTSNAP 600
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 574 QEKIKLERKRQRNRVAASKCRRRKLERISKLE-EKVK 681
+EK+K+E++R + +V A + R + E K+E EKVK
Sbjct: 948 EEKVKVEKERNKEKVKAEEERLKAEEEKVKIEKEKVK 984
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 574 QEKIKLERKRQRNRVAASKCRRRKLERISKLE-EKVK 681
+EK+K+E++R + +V A + R + E K+E EKVK
Sbjct: 909 EEKVKVEKERNKEKVKAEEERLKAEEEKVKIEKEKVK 945
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 499 HREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 609
H E QTV + + P P+D + EK+KL+ +R
Sbjct: 486 HAEVASQTVETEITRPDSPPVDYEAFEKMKLKENSRR 522
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 507 FTMGVGYRSSGLSKSAYTLRPSGVTASPW 421
F GVGY S Y LR +G ++PW
Sbjct: 56 FKDGVGYNLDSQQGSTYNLRKNGGPSNPW 84
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 523 VPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKL 666
V S+PP SP+++++ EKI E QR S + + E + ++
Sbjct: 717 VDGPPSSPPPSPVNIESMEKINKESIFQRANSVLSGSKMSETEYVKEI 764
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +1
Query: 502 REDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
RE E + PSA T + DT+++ + E+K +R ++SK R+R+ +SK + ++
Sbjct: 296 RETEEEDPPSAFETAQ----EFDTEDEEE-EKKPKRGTASSSKRRKRRRMWVSKKDRRL 349
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +1
Query: 502 REDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKV 678
RE E + PSA T + DT+++ + E+K +R ++SK R+R+ +SK + ++
Sbjct: 309 RETEEEDPPSAFETAQ----EFDTEDEEE-EKKPKRGTASSSKRRKRRRMWVSKKDRRL 362
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 577 EKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
EK KLERK+++NR A C + + +L++ ++
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLE 296
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 577 EKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
EK KLERK+++NR A C + + +L++ ++
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLE 313
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 577 EKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
EK KLERK+++NR A C + + +L++ ++
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLE 313
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 577 EKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
EK KLERK+++NR A C + + +L++ ++
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNRNNSKEELKQTLE 296
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 144 PLSGPVENLKRPLTLDVGRGGKRSRI 221
P GPV+ K+P T+D GR R+++
Sbjct: 34 PTKGPVQPQKKPTTVDNGRRAYRNQV 59
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 144 PLSGPVENLKRPLTLDVGRGGKRSRI 221
P GPV+ K+P T+D GR R+++
Sbjct: 34 PTKGPVQPQKKPTTVDNGRRAYRNQV 59
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 101 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 235
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 101 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 235
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 334 SACLISRSSTYGGTRNV 384
S CL S SSTYGG RN+
Sbjct: 7 SHCLKSSSSTYGGIRNI 23
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 101 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 235
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 559 IDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+ +D +E +KLE++ + + SK ++ KLE + EE+ +
Sbjct: 496 VRIDLEETLKLEKRIEEVSIEESKKKQEKLELKQREEEEAR 536
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 508 DEPQTVPSAASTPPLSPIDMDTQEK-----IKLERKRQRNRVAASKCRRRKLERISKLEE 672
+E +T+ A + +PID + +E+ K +RK N SK RRR LE S +
Sbjct: 990 NERKTIAPARRSVGDTPIDNEKEERECRSNTKKQRKVAENEKNPSKLRRRLLEASSDKSD 1049
Query: 673 K 675
K
Sbjct: 1050 K 1050
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 508 DEPQTVPSAASTPPLSPIDMDTQEK-----IKLERKRQRNRVAASKCRRRKLERISKLEE 672
+E +T+ A + +PID + +E+ K +RK N SK RRR LE S +
Sbjct: 990 NERKTIAPARRSVGDTPIDNEKEERECRSNTKKQRKVAENEKNPSKLRRRLLEASSDKSD 1049
Query: 673 K 675
K
Sbjct: 1050 K 1050
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 523 VPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLE 669
+PS +S P SP DM + L + R R+ A +R L+RI+ +
Sbjct: 192 LPSTSSGIPASPADMTASSRNPLRKVRYSLRLPAKAAQR--LKRIANFQ 238
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 568 DTQEKIKLERKRQRNRVAASKCRRRKL---ERISKLEE 672
+ +E+ + ER+ Q R+AA K R+R+ E I++L E
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNE 637
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 568 DTQEKIKLERKRQRNRVAASKCRRRKL---ERISKLEE 672
+ +E+ + ER+ Q R+AA K R+R+ E I++L E
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNE 637
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 568 DTQEKIKLERKRQRNRVAASKCRRRKL---ERISKLEE 672
+ +E+ + ER+ Q R+AA K R+R+ E I++L E
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNE 637
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 568 DTQEKIKLERKRQRNRVAASKCRRRKL---ERISKLEE 672
+ +E+ + ER+ Q R+AA K R+R+ E I++L E
Sbjct: 600 EEEERREKERREQERRIAAEKERKRRQEEEEEIARLNE 637
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,110,510
Number of Sequences: 27780
Number of extensions: 344040
Number of successful extensions: 1211
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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