Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40384
(682 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g42990.1 68414.m04949 bZIP transcription factor family protei... 32 0.31
At5g23770.1 68418.m02791 agenet domain-containing protein contai... 31 0.53
At3g56910.1 68416.m06330 expressed protein 31 0.93
At5g51150.1 68418.m06342 expressed protein similar to unknown pr... 29 2.2
At1g22070.1 68414.m02760 bZIP family transcription factor (TGA3)... 29 2.2
At2g40950.1 68415.m05056 bZIP transcription factor family protei... 29 2.8
At1g09770.1 68414.m01096 myb family transcription factor contain... 29 2.8
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 3.8
At5g58360.1 68418.m07307 ovate family protein 69% similar to ova... 28 5.0
At5g23780.1 68418.m02792 agenet domain-containing protein contai... 28 5.0
At3g10800.1 68416.m01300 bZIP transcription factor family protei... 28 5.0
At1g77920.1 68414.m09080 bZIP family transcription factor contai... 28 5.0
At5g56890.1 68418.m07099 protein kinase family protein contains ... 28 6.6
At2g32230.1 68415.m03938 pentatricopeptide (PPR) repeat-containi... 28 6.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 28 6.6
At5g42590.1 68418.m05185 cytochrome P450 71A16, putative (CYP71A... 27 8.7
At4g23570.2 68417.m03396 phosphatase-related low similarity to p... 27 8.7
At4g23570.1 68417.m03395 phosphatase-related low similarity to p... 27 8.7
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 27 8.7
>At1g42990.1 68414.m04949 bZIP transcription factor family protein
contains Pfam profile: PF00170: bZIP transcription
factor
Length = 295
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 568 DTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
D K R+R RNR AA + R RK E + LE+K K
Sbjct: 136 DDDAVAKKRRRRVRNRDAAVRSRERKKEYVQDLEKKSK 173
>At5g23770.1 68418.m02791 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 438
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 484 AIPHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNR 615
++ +++ D P T P TPPL I+ TQ K ++ RN+
Sbjct: 176 SVRNANESDPPLTPPPGIITPPLKQIEAGTQRKALSKKTLPRNQ 219
>At3g56910.1 68416.m06330 expressed protein
Length = 148
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 505 EDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEK 675
++EP+TV +A L + +EK+ LE + + + RR++L R K+ +K
Sbjct: 78 KEEPKTVVAAVPVDKLPLESKEAKEKLLLELRLKMKLAKKIRLRRKRLVRKRKMRKK 134
>At5g51150.1 68418.m06342 expressed protein similar to unknown
protein (gb|AAD46013.1)
Length = 531
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 511 EPQTVPSAASTPPLSPIDMDTQE-KIKLERKRQRNRVAASKCRRRK 645
+P PS+ S PP+SP+ D+ E + +L +R R A ++ +RR+
Sbjct: 7 KPDLDPSS-SPPPISPLSQDSSEAERRLREAEERLRDAMAELQRRQ 51
>At1g22070.1 68414.m02760 bZIP family transcription factor (TGA3)
identical to transcription factor GI:304113 from
[Arabidopsis thaliana]
Length = 384
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 547 PLSPIDMDTQEKI--KLERKRQRNRVAASKCRRRKLERISKLEE 672
P S D D +++I K++R+ +NR AA K R RK + +LEE
Sbjct: 84 PSSNNDQD-EDRINDKMKRRLAQNREAARKSRLRKKAHVQQLEE 126
>At2g40950.1 68415.m05056 bZIP transcription factor family protein
similar to AtbZIP transcription factor GI:17065880 from
[Arabidopsis thaliana]; contains Pfam profile: bZIP
transcription factor PF00170
Length = 721
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 574 QEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
+E K + RNR +A R+RK + +LEEKV+
Sbjct: 226 EEDEKKRARLMRNRESAQLSRQRKKHYVEELEEKVR 261
>At1g09770.1 68414.m01096 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 844
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = +1
Query: 490 PHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLE 669
P R E P A P P+DMD EK L R R K +RK R +LE
Sbjct: 119 PRKLRPGEIDPNPEAKPARP-DPVDMDEDEKEMLSEARARLANTRGKKAKRK-AREKQLE 176
Query: 670 E 672
E
Sbjct: 177 E 177
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 559 IDMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEE 672
IDM ++ ++E+K++ R K + +LER EE
Sbjct: 238 IDMLVKKNAEMEKKKEEERERKKKMEKERLERAMNYEE 275
>At5g58360.1 68418.m07307 ovate family protein 69% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 296
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 514 PQTVPSAASTPPLSPIDMDTQEKIKLERKRQRN-RVAASKCRRRKLERISKLEEK 675
P P A PP +M TQ+K+K + ++ R++K ER S++ +K
Sbjct: 168 PNLSPETAKEPPF---EMMTQQKLKKPKAHSSGIKIPTKIVRKKKKERTSQVSKK 219
>At5g23780.1 68418.m02792 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 426
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 472 QAARAIPHSHREDEPQTVPSAASTPPLSPIDMDTQEK 582
+ + ++ +++ D P T +TPPL I+ +TQ K
Sbjct: 174 ETSDSVRNANESDPPVTPRPGITTPPLKQIEAETQRK 210
>At3g10800.1 68416.m01300 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; contains similarity to TGACG-sequence specific
DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana
tabacum]
Length = 675
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 568 DTQEKIKLERKRQRNRVAASKCRRRKLERISKLEEKVK 681
D +K KL R+ RNR +A R RK ++ +LE KVK
Sbjct: 187 DDDDKRKLIRQI-RNRESAQLSRLRKKQQTEELERKVK 223
>At1g77920.1 68414.m09080 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 368
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 562 DMDTQEKIKLERKRQRNRVAASKCRRRKLERISKLEE 672
D D + K++R+ +NR AA K R RK + +LEE
Sbjct: 85 DDDGRIHDKMKRRLAQNREAARKSRLRKKAYVQQLEE 121
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +1
Query: 466 FGQAARAIPHSHREDE--PQTVPSAASTPPLSPI 561
FGQA P SH+ D P S S PPL+ +
Sbjct: 45 FGQAPSNSPESHKSDNVPPSKASSQPSLPPLADL 78
>At2g32230.1 68415.m03938 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 572
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +1
Query: 421 PRRGSDAART*SICRFGQAARAIPHSHREDEPQTVPSAASTPPLSPIDMDTQEKIKLERK 600
PR S CR G A +A E + VP L + MDT+ K+ +
Sbjct: 209 PRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKT 268
Query: 601 RQRNR 615
QR R
Sbjct: 269 LQRLR 273
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 158 RAAERILLVIEGGLHAVAGIPNHVFAPN 75
+AA+ I + +G HA+AG HV PN
Sbjct: 786 KAAQGIKIAAQGLEHAIAGTALHVIGPN 813
>At5g42590.1 68418.m05185 cytochrome P450 71A16, putative (CYP71A16)
Identical to Cytochrome P450 71A16 (SP:Q9FH66)
[Arabidopsis thaliana]
Length = 497
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 178 P*PWMLGGVGNVHE-SLHPFSPRQIYNVEAR 267
P PW L +GN+H+ SLHP R + ++ AR
Sbjct: 34 PSPWRLPVIGNLHQLSLHPH--RALSSLSAR 62
>At4g23570.2 68417.m03396 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
domain, PF04969: CS domain
Length = 350
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 514 PQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAAS 627
P T+PS+ + PP+S +D+ K + E ++ V +
Sbjct: 129 PSTLPSSVTAPPVSELDVTPTAKYRHEYYQKPEEVVVT 166
>At4g23570.1 68417.m03395 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
domain, PF04969: CS domain
Length = 350
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 514 PQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAAS 627
P T+PS+ + PP+S +D+ K + E ++ V +
Sbjct: 129 PSTLPSSVTAPPVSELDVTPTAKYRHEYYQKPEEVVVT 166
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 268 SELQHCKSGEERTGAAIRERFPPRPTSKVRGLLR 167
S +Q C G R ++++FP P +K+R +R
Sbjct: 714 STIQSCSQGINRVVETLQQKFPDVPKTKLRQKVR 747
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,517,087
Number of Sequences: 28952
Number of extensions: 328511
Number of successful extensions: 1062
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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