Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40383
         (630 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F21C7A Cluster: PREDICTED: hypothetical protein;...    35   1.9  
UniRef50_A0DPW6 Cluster: Chromosome undetermined scaffold_6, who...    33   5.7  
UniRef50_UPI00015B52A1 Cluster: PREDICTED: similar to ATP-bindin...    32   9.9  
UniRef50_Q02W57 Cluster: Membrane protein for polysaccharide tra...    32   9.9  
UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2; ...    32   9.9  

>UniRef50_UPI0000F21C7A Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 503

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -2

Query: 203 MKTYSDLCVYNTTRIHR*PTRLASY*YRFSILIKYLASLCYL-FHLTYTYNAMDIKLKPL 27
           ++T S++C Y      R   +   Y   F++  ++   +CYL +H  YTY  +   LK L
Sbjct: 274 LRTGSEICYYRNNFCPRRGQKHPFYTLTFTVTFRHEDDVCYLAYHYPYTYTTLQTHLKML 333

Query: 26  SGANHAKK 3
             +   +K
Sbjct: 334 EKSVDPRK 341


>UniRef50_A0DPW6 Cluster: Chromosome undetermined scaffold_6, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_6,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 592

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
 Frame = -1

Query: 555 CCVPLHCPVLTCITAE*KILQHEINYNNICSYNNLRFFNCFTGWIIIL*ISYLYEDLRL* 376
           CC+   C +LT I    KIL    +Y+N+ + N+L F N     + +     +Y +L+L 
Sbjct: 108 CCISPQC-LLTSIPNNFKILLQLFDYSNLSTLNHLNFNNLD---VFVFTPYTVYLELKLY 163

Query: 375 NILKTDFKSEINKIKIT*FIEPPRFLIQLNLYIGVPSWLINIFCMLRCKYL----LFFNF 208
            I     + +I+K  +  F     +    N+ +   S L+N F +L   ++    L FNF
Sbjct: 164 QIAFHILQYQIDKKTLPQFKHTDSY---NNIILQRMSLLLNEFLLLHSIFINLFFLSFNF 220

Query: 207 SHEN 196
           S+ +
Sbjct: 221 SNND 224


>UniRef50_UPI00015B52A1 Cluster: PREDICTED: similar to ATP-binding
           cassette transporter; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ATP-binding cassette transporter -
           Nasonia vitripennis
          Length = 1202

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +2

Query: 455 LLYEQMLL*L-ISCCNIFYSAVMHVSTGQCSGTQHSVIDFRLFIIRLSVPI 604
           L+ EQ+LL +  S C ++ + ++ +   Q  GT+HS+++F L  +R  + +
Sbjct: 170 LILEQLLLHIDTSMCYVYITLLLLLQIVQTFGTRHSMVEFTLIGVRARIAL 220


>UniRef50_Q02W57 Cluster: Membrane protein for polysaccharide
           transport; n=2; Lactococcus lactis subsp. cremoris|Rep:
           Membrane protein for polysaccharide transport -
           Lactococcus lactis subsp. cremoris (strain SK11)
          Length = 507

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
 Frame = +2

Query: 119 IYIN-SSLSE*ATYVFVWYCIHIDLSTFSWLKLKKSRYLHLNMQKILINHEG---TPIYR 286
           +++N SS++E    V+V Y + +  S FS+L + K   L  + +K LIN      T IY 
Sbjct: 111 VFVNMSSINE---NVYVIYLLFLADSAFSYLLIYKQSILIAHQKKHLINLADLAYTIIYN 167

Query: 287 FN*IKKRGGSMNYVILILFISLLKSVFNI 373
              I     + NY++++L +  L+   NI
Sbjct: 168 LGQIALLILTHNYILILLLVLFLRLAENI 196


>UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 3018

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 119 IYINSSLSE*ATYVFVWYCIHI-DLSTFSWLKLKKSRYLHLN 241
           IYIN+S+     Y+   YC +I D   FS++ L   +Y H+N
Sbjct: 50  IYINTSICNSFIYIITKYCFYIFDNKDFSFVTLYALKYDHVN 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,566,149
Number of Sequences: 1657284
Number of extensions: 9473883
Number of successful extensions: 18378
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18358
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)