Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40383
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.5  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   6.1  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   8.0  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 501  ILQHEINYNNICSYNNLRF 445
            ILQH++  NN  S NN +F
Sbjct: 3270 ILQHKLYSNNSQSLNNFKF 3288


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 576 SLKSITECCVPLHCPVLTCITAE 508
           +LK +T CC   HC + T +T E
Sbjct: 205 NLKVMTICCSIGHCTLYTRMTIE 227


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 164 VWYCIHIDLSTFSWLKLKKSRYL 232
           ++ C H+ L+ F W+    S YL
Sbjct: 128 IYCCSHLCLAIFYWVAPSSSTYL 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,873
Number of Sequences: 2352
Number of extensions: 10542
Number of successful extensions: 52
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)