Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40378
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa... 32 1.9
AB209126-1|BAD92363.1| 897|Homo sapiens I-kappa-B-related prote... 32 1.9
X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein. 30 5.8
BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein. 30 5.8
BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein. 30 5.8
BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein. 30 5.8
AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth ... 30 5.8
AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein. 30 5.8
AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens ... 30 5.8
AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein. 30 5.8
>BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor-li
protein.
Length = 1219
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2
Query: 425 EPWPKPWTRRSSLPRGFSSSTGKSLKTAPPPRCR 526
EP P T R S P G SS+ G+ L APPP R
Sbjct: 742 EPPGSPSTPRVSEPSGDSSAAGQPLGPAPPPPIR 775
>AB209126-1|BAD92363.1| 897|Homo sapiens I-kappa-B-related protein
variant protein.
Length = 897
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2
Query: 425 EPWPKPWTRRSSLPRGFSSSTGKSLKTAPPPRCR 526
EP P T R S P G SS+ G+ L APPP R
Sbjct: 601 EPPGSPSTPRVSEPSGDSSAAGQPLGPAPPPPIR 634
>X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth
factor protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ13286 fis, clone OVARC1001154, highly similar to
Homo sapiens clone 24720 epithelin 1 and 2 mRNA. ).
Length = 413
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 368 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 413
>AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,133,093
Number of Sequences: 237096
Number of extensions: 1857342
Number of successful extensions: 7836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7835
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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