Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40377
(632 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 25 0.81
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 24 1.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.9
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 3.3
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 23 3.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.3
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 22 5.7
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 21 7.5
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 21 7.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 9.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.9
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 9.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.9
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 24.6 bits (51), Expect = 0.81
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 118 QVIPENVIDVQQNQKNPLDYPDYF 189
Q+IP+ V D +N +NP+D + F
Sbjct: 397 QMIPKQVADRLRNGENPIDTCEMF 420
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 78 FCISTPCITQNHYVSFCPIYIGKGN 4
F + T CI +++F PIY G GN
Sbjct: 710 FTMYTTCII---WLAFVPIYFGTGN 731
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 78 FCISTPCITQNHYVSFCPIYIGKGN 4
F + T CI +++F PIY G GN
Sbjct: 800 FTMYTTCII---WLAFVPIYFGTGN 821
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +1
Query: 424 HISWKKQQWNVENMLIQDSGEVVSSQMPTAVWCYNKIT 537
H +Q+WN + ++ G V + A W + ++T
Sbjct: 1498 HKKKNQQEWNQVSNNVKPGGNFVVLDLVPATWYHLRVT 1535
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 281 IHIWFKTWTPH 313
I +WF WTP+
Sbjct: 284 ISLWFMAWTPY 294
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 22.6 bits (46), Expect = 3.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 281 IHIWFKTWTPH 313
I +WF WTP+
Sbjct: 34 ISLWFMAWTPY 44
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 78 FCISTPCITQNHYVSFCPIYIGKGN 4
F + T C+ +++F P+Y G GN
Sbjct: 852 FTMYTTCVI---WLAFVPLYFGTGN 873
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 557 NTQNNILNQHTAVRVVPKC 613
+T+NN+LN + ++V C
Sbjct: 52 DTKNNLLNAYVRFKLVTDC 70
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 21.4 bits (43), Expect = 7.5
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -1
Query: 518 QTAVGICEDTTSPESCMSIFSTFHC 444
Q+ +G C T+ ++C I++ C
Sbjct: 108 QSVMGKCLPTSGSDNCNKIYNLAKC 132
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 21.4 bits (43), Expect = 7.5
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -1
Query: 518 QTAVGICEDTTSPESCMSIFSTFHC 444
Q+ +G C T+ ++C I++ C
Sbjct: 108 QSVMGKCLPTSGSDNCNKIYNLAKC 132
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +1
Query: 118 QVIPENVIDVQQNQKNPLDY 177
+V+PEN+++ QQ + +Y
Sbjct: 698 EVLPENLVNAQQQVQAVRNY 717
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 530 RLPDLCIFLNT 562
R PD C+F NT
Sbjct: 331 RTPDQCLFYNT 341
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 438 KTAMECGEYAHTR 476
+ AM+ GEY HT+
Sbjct: 55 QAAMQSGEYDHTK 67
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 9.9
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 97 RYTSTS-PQVIPENVIDVQQNQKNPLDYPDYFGVHNLFTV 213
R T TS PQ + QQ Q+ Y +HNL+ V
Sbjct: 1440 RKTLTSAPQQPQQQQQQQQQQQQQQQQLNHYPDLHNLYAV 1479
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,622
Number of Sequences: 438
Number of extensions: 4160
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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