Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40367
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL844165-3|CAI15333.1|  231|Homo sapiens ARV1 homolog (S. cerevi...    32   1.4  
AL732414-1|CAH73699.1|  231|Homo sapiens ARV1 homolog (S. cerevi...    32   1.4  

>AL844165-3|CAI15333.1|  231|Homo sapiens ARV1 homolog (S.
           cerevisiae) protein.
          Length = 231

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -3

Query: 581 NVTPVRVTPSIAEESNEYRRI**HQNAREAQRQKRIESFKVFVAF*ALNTVFSCTLVEFY 402
           NV  V  TP+ A  S +YR I  +Q A+E  R       K+ +       +F C L E Y
Sbjct: 15  NVDGVAATPTAASASCQYRCIECNQEAKELYRDYNHGVLKITICIHGKLCIF-CLLCEAY 73

Query: 401 LSRTPARSNNVDT 363
           L     + +N +T
Sbjct: 74  LRWWQLQDSNQNT 86


>AL732414-1|CAH73699.1|  231|Homo sapiens ARV1 homolog (S.
           cerevisiae) protein.
          Length = 231

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -3

Query: 581 NVTPVRVTPSIAEESNEYRRI**HQNAREAQRQKRIESFKVFVAF*ALNTVFSCTLVEFY 402
           NV  V  TP+ A  S +YR I  +Q A+E  R       K+ +       +F C L E Y
Sbjct: 15  NVDGVAATPTAASASCQYRCIECNQEAKELYRDYNHGVLKITICIHGKLCIF-CLLCEAY 73

Query: 401 LSRTPARSNNVDT 363
           L     + +N +T
Sbjct: 74  LRWWQLQDSNQNT 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,685,923
Number of Sequences: 237096
Number of extensions: 1866989
Number of successful extensions: 3008
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3008
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)