Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40367
(625 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 1.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 23 2.4
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 23 3.2
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.6
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 7.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 7.4
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 7.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.8
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 420 TTKNCIQRLERNKHFKTLNS-LLALC 494
+TK ++R + +HF+ LNS + ALC
Sbjct: 382 STKLTLKRHKEQQHFQPLNSAVCALC 407
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 320 LVFVFWKCSNTPCVLCLHYCYALGFG 397
+VF+F KCS P + Y LG G
Sbjct: 15 IVFLFDKCSGYPSIRQGTTSYCLGCG 40
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 58 IVSIFTTYLRNIYPTN 11
+ SI+ TY +NI P N
Sbjct: 42 VPSIYLTYAKNILPNN 57
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 561 YSYRSNIIITYPCNRI 608
Y Y NIII+ P RI
Sbjct: 364 YQYNFNIIISEPTERI 379
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 24 MFRKYVVNIETINMKKRAYKG 86
+++ Y++NIE I + Y G
Sbjct: 116 LYKNYIINIEQIPVPVPVYYG 136
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 24 MFRKYVVNIETINMKKRAYKG 86
+++ Y++NIE I + Y G
Sbjct: 116 LYKNYIINIEQIPVPVPVYYG 136
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +1
Query: 244 TRIRYFTVQPHRGCICLSKPKFINPISFRFLEVLEYTLCFVSTL 375
T + YFT G C +NP +F + T+ F + L
Sbjct: 308 TGVDYFTQINRNGIACWDTNTELNPNTFILVAENNTTMVFCNDL 351
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 49 IFTTYLRNIYPTNKEL 2
+F+T R YPTN+ L
Sbjct: 122 VFSTLQRAEYPTNRSL 137
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.4
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +1
Query: 91 RLDTLIYWNPFYQ 129
+L +++W PF+Q
Sbjct: 221 KLRNIVHWTPFFQ 233
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.4
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +1
Query: 91 RLDTLIYWNPFYQ 129
+L +++W PF+Q
Sbjct: 136 KLRNIVHWTPFFQ 148
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.4
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +1
Query: 91 RLDTLIYWNPFYQ 129
+L +++W PF+Q
Sbjct: 455 KLRNIVHWTPFFQ 467
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 47 YRNNQYEKTRLQRIFGWIP*YIGILFINVYVPMY 148
Y NN Y +++ + YI + I V VP+Y
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 47 YRNNQYEKTRLQRIFGWIP*YIGILFINVYVPMY 148
Y NN Y +++ + YI + I V VP+Y
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 47 YRNNQYEKTRLQRIFGWIP*YIGILFINVYVPMY 148
Y NN Y +++ + YI + I V VP+Y
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 47 YRNNQYEKTRLQRIFGWIP*YIGILFINVYVPMY 148
Y NN Y +++ + YI + I V VP+Y
Sbjct: 97 YNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,295
Number of Sequences: 438
Number of extensions: 4772
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -