Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40366
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030618-1|AAH30618.1|  589|Homo sapiens hypothetical protein LO...    49   1e-05
BC063561-1|AAH63561.1|  552|Homo sapiens hypothetical protein FL...    33   1.2  
AK026315-1|BAB15442.1|  506|Homo sapiens protein ( Homo sapiens ...    33   1.2  
AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens ...    30   6.6  

>BC030618-1|AAH30618.1|  589|Homo sapiens hypothetical protein
           LOC196463 protein.
          Length = 589

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 25/69 (36%), Positives = 38/69 (55%)
 Frame = +1

Query: 1   RILKRYKLNYHKTSKEDSESVPGTSIDFSSYPGSITSQDEFYLVKGNKHRMAVAGTALRN 180
           R++K+Y L + +    D   VPG  + FSSYPG+I S D+FY++      +    T + N
Sbjct: 272 RVIKKYWLQFREGPWGDYPLVPGNKLVFSSYPGTIFSCDDFYILGSG---LVTLETTIGN 328

Query: 181 YNNKLWQEV 207
            N  LW+ V
Sbjct: 329 KNPALWKYV 337



 Score = 35.1 bits (77), Expect = 0.23
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 231 WTSYNCCEHLATNVSSWGHIIAKNNSGSASKQWLIVDLNRF 353
           W        LA++ ++W  I  + NSG+ + QW+IVD   F
Sbjct: 346 WVRNIVANRLASDGATWADIFKRFNSGTYNNQWMIVDYKAF 386


>BC063561-1|AAH63561.1|  552|Homo sapiens hypothetical protein
           FLJ22662 protein.
          Length = 552

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 26/86 (30%), Positives = 42/86 (48%)
 Frame = +1

Query: 1   RILKRYKLNYHKTSKEDSESVPGTSIDFSSYPGSITSQDEFYLVKGNKHRMAVAGTALRN 180
           RI K +  N     K+ S S     + FSSYPG + S D+FY++      + +  T    
Sbjct: 255 RIYKHWDFNI--IDKDTSSS----RLSFSSYPGFLESLDDFYILSSG---LILLQTTNSV 305

Query: 181 YNNKLWQEVNITEQVPAGPRITAANI 258
           +N  L ++V I E + +  R+  AN+
Sbjct: 306 FNKTLLKQV-IPETLLSWQRVRVANM 330


>AK026315-1|BAB15442.1|  506|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22662 fis, clone HSI08080. ).
          Length = 506

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 26/86 (30%), Positives = 42/86 (48%)
 Frame = +1

Query: 1   RILKRYKLNYHKTSKEDSESVPGTSIDFSSYPGSITSQDEFYLVKGNKHRMAVAGTALRN 180
           RI K +  N     K+ S S     + FSSYPG + S D+FY++      + +  T    
Sbjct: 209 RIYKHWDFNI--IDKDTSSS----RLSFSSYPGFLESLDDFYILSSG---LILLQTTNSV 259

Query: 181 YNNKLWQEVNITEQVPAGPRITAANI 258
           +N  L ++V I E + +  R+  AN+
Sbjct: 260 FNKTLLKQV-IPETLLSWQRVRVANM 284


>AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39978 fis, clone SPLEN2029380. ).
          Length = 261

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -3

Query: 511 RCVSPGTCSTNSTRPLP*LLLDRYI-VCFTSFEISVTTSLCPCLCFSWCSERVSNLLRST 335
           + +S  T S  STR  P  LL  Y+ +C T      + SLCPC+  S C      L    
Sbjct: 9   KLISQVTGSRYSTRSSPLFLLCLYLGICLT-----FSVSLCPCIVLSACLSASLFLPPCC 63

Query: 334 ISHCFDADPELFL 296
           + H   A   +FL
Sbjct: 64  VFHYIVAFLSIFL 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,663,515
Number of Sequences: 237096
Number of extensions: 2464799
Number of successful extensions: 5444
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5443
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)