Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40365
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 33 0.17
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 32 0.30
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC087078-1|AAG37943.1| 198|Caenorhabditis elegans Hypothetical ... 29 2.8
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 27 8.7
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 112 bits (270), Expect = 2e-25
Identities = 52/84 (61%), Positives = 67/84 (79%)
Frame = +2
Query: 254 EQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRD 433
++IR ++RG + +LMGKNTM+RKA++ HL NP+LEKLLPHI NVGFVFT+ DL E+R
Sbjct: 41 QEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRS 100
Query: 434 KLLENKVQAPARPGAIAPLSVVIP 505
KLLEN+ APA+ GAIAP V +P
Sbjct: 101 KLLENRKGAPAKAGAIAPCDVKLP 124
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/45 (82%), Positives = 43/45 (95%)
Frame = +1
Query: 511 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 645
NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE
Sbjct: 127 NTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASE 171
Score = 69.3 bits (162), Expect = 2e-12
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = +3
Query: 135 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQM 254
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQM 40
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 IRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRD 433
IR + +S GKN ++ A+ + A L K +KG G +FT EV
Sbjct: 56 IRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEA 115
Query: 434 KLLENKVQAPARPGAIAPLSVVIP 505
+ E + AR G +A +VV+P
Sbjct: 116 EFSEASEEDYARVGDVATETVVLP 139
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 540 RGLLWTEAGVVAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 388
RG T + A TT P AG WT+ +N ++R TR P +PT
Sbjct: 178 RGTTNTNRNIKAHETTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = -3
Query: 528 WTEAGVVAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 388
WT T G A WT+ +N ++R TR P PT
Sbjct: 823 WTNGANGTTSGTSRGFTQRPTAAGWTIRANGITRGQTRVPGTTRGPT 869
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/56 (23%), Positives = 21/56 (37%)
Frame = +3
Query: 282 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 449
P C+ + C T ++P+ C H + T CSP + C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162
>AC087078-1|AAG37943.1| 198|Caenorhabditis elegans Hypothetical
protein Y34F4.2 protein.
Length = 198
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +3
Query: 42 W*SHFEFVPHGSRAFCLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFI 221
W EFV +G + LV SP+ L E+ A K KI L E P F+
Sbjct: 128 WDEEHEFVRYGYSLWLLVASICISPFNILVVRRFEESAEMKQK-LTKIYPLTSEIPNDFV 186
Query: 222 V 224
V
Sbjct: 187 V 187
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 90 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 203
L+ K S ++ +SR+ +EDK + SN+++K QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 267 IRICSSVASPRYRHPR*NILG 205
+++C + P YRHP N +G
Sbjct: 127 VKVCKKILVPIYRHPNFNFIG 147
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 267 IRICSSVASPRYRHPR*NILG 205
+++C + P YRHP N +G
Sbjct: 127 VKVCKKILVPIYRHPNFNFIG 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,481,444
Number of Sequences: 27780
Number of extensions: 376336
Number of successful extensions: 1134
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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