Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40360
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus interr...    29   4.7  
AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA pr...    29   4.7  
AE014296-3140|AAO41232.1|  514|Drosophila melanogaster CG9614-PL...    29   6.2  
AE014296-3139|AAO41231.1|  409|Drosophila melanogaster CG9614-PE...    29   6.2  
X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein ( Dros...    29   8.2  

>U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus
           interruptus dominant proteinprotein.
          Length = 1397

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 56  IESNQGLCTWRATKVITIQVSELIEDVDNTHIDEENNSLIIEQE 187
           IE+N   C WR+ ++  I   EL++ ++N HI     + +   E
Sbjct: 449 IETN---CHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWE 489


>AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA
           protein.
          Length = 1397

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 56  IESNQGLCTWRATKVITIQVSELIEDVDNTHIDEENNSLIIEQE 187
           IE+N   C WR+ ++  I   EL++ ++N HI     + +   E
Sbjct: 449 IETN---CHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWE 489


>AE014296-3140|AAO41232.1|  514|Drosophila melanogaster CG9614-PL,
           isoform L protein.
          Length = 514

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 244 KINGITILNNSGQMHYINKWIVLNKKKDSQINLTPILTKP 363
           KING T   N G  H   + IV+NK++ + + +  +LT+P
Sbjct: 239 KINGFTHARNKGSAH---ETIVMNKQRQNDL-IADLLTRP 274


>AE014296-3139|AAO41231.1|  409|Drosophila melanogaster CG9614-PE,
           isoform E protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 244 KINGITILNNSGQMHYINKWIVLNKKKDSQINLTPILTKP 363
           KING T   N G  H   + IV+NK++ + + +  +LT+P
Sbjct: 134 KINGFTHARNKGSAH---ETIVMNKQRQNDL-IADLLTRP 169


>X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein (
           Drosophila ciD (cubitusinterruptus Dominant) locus mRNA.
           ).
          Length = 1377

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 56  IESNQGLCTWRATKVITIQVSELIEDVDNTHIDEENNSLIIEQE 187
           IE+N   C WR  ++  I   EL++ ++N HI     + +   E
Sbjct: 449 IETN---CHWRRCRIEFITQDELVKHINNDHIQTNKKAFVCRWE 489


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,553,573
Number of Sequences: 53049
Number of extensions: 606154
Number of successful extensions: 1485
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)