Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40355
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   2.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   2.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.6  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   8.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.7  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 608 LTEAQDKIKDEKLSKDLAQSKTEVDSIF 691
           LTEAQ K  +EK+S  L+  + E+   F
Sbjct: 123 LTEAQYKEMEEKVSSTLSGLEGELKGTF 150


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 608 LTEAQDKIKDEKLSKDLAQSKTEVDSIF 691
           LTEAQ K  +EK+S  L+  + E+   F
Sbjct: 139 LTEAQYKEMEEKVSSTLSGLEGELKGTF 166


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 17  KTQYRICPSPPIMCLRPPSMPV 82
           +T+ R+ P PP    + PSMP+
Sbjct: 632 ETEERLPPLPPKRIRKMPSMPL 653


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 121 PEVVFCLLDDRD 86
           P++V CL+D RD
Sbjct: 87  PKLVICLIDPRD 98


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 260 SAVGCWN 240
           SAVGCWN
Sbjct: 323 SAVGCWN 329


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 260 SAVGCWNWLV 231
           +AVGCWN L+
Sbjct: 336 NAVGCWNSLL 345


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 260 SAVGCWN 240
           SA+GCWN
Sbjct: 326 SAIGCWN 332


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 260 SAVGCWN 240
           SA+GCWN
Sbjct: 326 SAIGCWN 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,114
Number of Sequences: 438
Number of extensions: 4542
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)