Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40353
(755 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 59 3e-09
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 58 6e-09
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 57 1e-08
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 56 4e-08
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 56 4e-08
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 44 1e-04
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 36 0.026
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 33 0.25
01_06_0695 - 31292622-31293317 31 0.75
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 31 0.99
02_05_0679 + 30817768-30818001 31 1.3
03_05_0489 - 24858483-24858637,24858811-24858921,24859013-248594... 30 2.3
01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816 30 2.3
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 29 3.0
11_01_0066 - 536281-537196,537397-537452 29 5.3
08_02_0449 - 17250468-17250732,17250821-17250849 29 5.3
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 29 5.3
03_01_0523 - 3923896-3924190,3924516-3924751 29 5.3
02_05_0515 + 29689259-29689535,29689867-29690209,29690475-296907... 28 7.0
10_08_0760 + 20381117-20381350,20381451-20381639,20382317-20382910 28 9.2
04_04_1100 + 30894575-30895012,30896082-30897044 28 9.2
03_01_0515 - 3864796-3865425 28 9.2
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 28 9.2
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +1
Query: 487 TETVYCRIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLP 654
T+ I G LGGGLE A+AC RI+ ++ GLPE+ LG++PG GGTQRLP
Sbjct: 104 TKPSVAAIDGLALGGGLEVAMACHARISTPTAQ--LGLPELQLGVIPGFGGTQRLP 157
Score = 36.3 bits (80), Expect = 0.026
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 4/169 (2%)
Frame = +2
Query: 260 NVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCK-TKEEV 436
N VNSL+ V+ + E + ++A ++++GK G F G DIS + + K E
Sbjct: 27 NPPVNSLSIDVLLSLKENYAEALRRNDVKA-IVVTGKGGKFSGGFDISSFGSVQGGKVEQ 85
Query: 437 VSLSKRGHEIFR-RIEQSRKPYIAAYK--AAV*EVD*RLLLHVNIALL*KTPKQDLDYQK 607
+ +I +E + KP +AA A ++ + H I+ TP L +
Sbjct: 86 PKVGYISIDIITDTLEAATKPSVAAIDGLALGGGLEVAMACHARIS----TPTAQLGLPE 141
Query: 608 SCWDFCPAVEGHRDYLALTSIPTTLDLALTGKTVKADKAKKLGNCSLLV 754
P G + L + L++ L K +K +A +LG LV
Sbjct: 142 LQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGLVDSLV 190
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +1
Query: 508 IQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLP 654
IQG LGGGLE + C RI+ +++ GLPE+ LG++PG GGTQRLP
Sbjct: 106 IQGLALGGGLELTMGCHARISTPEAQ--LGLPELTLGIIPGFGGTQRLP 152
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +1
Query: 508 IQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLP 654
I+G+ LGGGLE AL+C RI +++ GLPE L ++PG GGTQRLP
Sbjct: 112 IEGAALGGGLELALSCDLRICGENAT--LGLPETGLAIIPGAGGTQRLP 158
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 257 PNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMI 409
P VK N++N + M + +V ++E + ++ ++ S PG F AGAD+ +
Sbjct: 55 PEVK-NAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADLKAL 104
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 508 IQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLP 654
I G LGGGLE + C R++ ++ GLPE+ LG++PG GGTQRLP
Sbjct: 108 IDGVALGGGLELVMVCHARVSTSSAQ--LGLPELQLGIIPGLGGTQRLP 154
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +1
Query: 508 IQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLP 654
I G LGGGLE ++ C+ RI++ ++ GLPE+ LG++P GGTQRLP
Sbjct: 107 INGPALGGGLEISMVCQARISIPTAQ--LGLPELQLGVIPAFGGTQRLP 153
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
Frame = +1
Query: 508 IQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPG---------GGGTQRLP 654
++G+ GGGLE AL+C RI +++ F LPE L ++PG GGTQRLP
Sbjct: 144 VEGAAFGGGLELALSCDLRICGENAT--FSLPETGLAIIPGYVFKMALYFSGGTQRLP 199
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 269 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSL 445
+N++N ++ ++E ETN ++ ++ S P F AG D+ + N T E++ +
Sbjct: 30 LNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGGDVKRLANDCTMPEIIEV 88
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 508 IQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGT---QRLPGSHL 666
+ G +GGG ++ ++R+ + T F +PE LGL P G + RLPG ++
Sbjct: 136 LTGIVMGGGAGVSIHGRFRVVTES--TVFAMPETALGLFPDIGASYFLSRLPGFYV 189
>01_06_0695 - 31292622-31293317
Length = 231
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 659 EPGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 513
EP + P P + PN S S + S T+ + H RA P PR +P
Sbjct: 2 EPSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPRPVP 50
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 508 IQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGT 642
+ G +GGG ++ ++R+ V DS T F +PE LGL P G +
Sbjct: 242 LTGIVMGGGAGVSIHGRFRV-VTDS-TVFAMPETALGLFPDIGAS 284
>02_05_0679 + 30817768-30818001
Length = 77
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -1
Query: 653 GNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPP 528
GN+ +PPPP SP+ T G P LE +Y + +SN P
Sbjct: 38 GNIALPPPP--SPHWTGGHRLPPLE----QKYSRSCPISNDP 73
>03_05_0489 -
24858483-24858637,24858811-24858921,24859013-24859421,
24859746-24859800,24860042-24860318,24860442-24860562,
24860831-24861438,24861552-24861741
Length = 641
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 635 PPPGKSPNMTSGSPN--PVLESFTAMRYLHARAVSNPPPR 522
PPPGK + +G PN L +T +RY A+ PPP+
Sbjct: 551 PPPGKYYVVDAGYPNRPGYLSPYTRIRYHVAQWNDGPPPQ 590
>01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816
Length = 347
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 326 ETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVV--SLSKRGHEI 466
+ NSG+ A +I CF+ G D S++ N T E + S RG E+
Sbjct: 49 KNNSGVAAGLIRLHFHDCFVRGCDASVLINGSTTERSAGPNASLRGFEV 97
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 341 IEAAVIISGKPGCFIAGADISMIENCKTKEEVVSL--SKRGHE 463
+ A + G G F G D S + NC K V+ L S+RG E
Sbjct: 572 VGATDCVYGAQGAFYKGLDFSKVLNCDRKPAVLDLPPSRRGDE 614
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 656 PGNLCVPPPPGKSPNMTSGSPNP 588
P + PPPP +P T SP P
Sbjct: 232 PPSTATPPPPSPTPTTTRASPTP 254
>08_02_0449 - 17250468-17250732,17250821-17250849
Length = 97
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 641 HRDYLALTSIPTTLDLALTGKTVKADKAKKL 733
H DYL+L + PT L L+++ K V A ++ +L
Sbjct: 24 HADYLSLFTRPTGLSLSISSKHVCASRSWRL 54
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 269 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 412
+N+L +M ++ ++ + G+ AAV+++G+ F +G D++ E
Sbjct: 34 LNALTRPMMVSLAAAFRRLDADDGV-AAVVLAGRGRAFCSGVDLTAAE 80
>03_01_0523 - 3923896-3924190,3924516-3924751
Length = 176
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 539 RLLLHVNIALL*KTPKQDLDYQKSCWDFCPAVEGHRDYLALTSIPTTLDLALTGKTVKAD 718
RL HV++ + + K DL Q+S W + H L + T +AL GK +
Sbjct: 6 RLPTHVDVHVQCEGDKVDLMEQRSPWTSILQMSQHMGELGSIGLETPRGVALFGKRCGSI 65
Query: 719 KAKKLGNCSLL 751
+ + G +LL
Sbjct: 66 RLETPGGVALL 76
>02_05_0515 +
29689259-29689535,29689867-29690209,29690475-29690746,
29691282-29691478,29691874-29692237,29692831-29692898
Length = 506
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 632 VEGHRD-YLALTSIPTTLDLALTGKTVKADKAKKLGNCSL 748
VE H D Y SI L L G+ K+DK+ +L CS+
Sbjct: 180 VEDHVDAYARSKSIAEQLVLKSNGRQTKSDKSSRLYTCSI 219
>10_08_0760 + 20381117-20381350,20381451-20381639,20382317-20382910
Length = 338
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 290 VMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS-MIENCK----TKEEVVSLSKR 454
V +EVS V+ N G+ A ++ CF+ G D S +I++ K K+ + S R
Sbjct: 49 VQQEVSKAVS---ANPGLAAGLVRLHFHDCFVRGCDASVLIDSTKGNQAEKDAGPNTSLR 105
Query: 455 GHEIFRRIE 481
G E+ RI+
Sbjct: 106 GFEVVDRIK 114
>04_04_1100 + 30894575-30895012,30896082-30897044
Length = 466
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 605 SGSPNPVLESFTAMRY-LHARAVSNPPPRQLPC 510
+G LE+FTA + LHARA ++PP + C
Sbjct: 255 AGPGRTKLEAFTAHLWQLHARAAASPPRHRRSC 287
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 638 PPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 513
PPP P++TS P P S+PPP LP
Sbjct: 48 PPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLP 89
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 601 PEVMLGLLPGGGGTQRLPGSHL 666
PEV +G+ G GG+Q +PG L
Sbjct: 176 PEVRIGVAFGSGGSQAVPGMEL 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,276,001
Number of Sequences: 37544
Number of extensions: 434799
Number of successful extensions: 1751
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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