Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40350
(729 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcript... 33 1.4
M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription ... 33 1.4
L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription ... 33 1.4
BC110830-1|AAI10831.1| 377|Homo sapiens RELA protein protein. 33 1.4
BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein. 33 1.4
BC014095-1|AAH14095.1| 246|Homo sapiens RELA protein protein. 33 1.4
BC011603-1|AAH11603.1| 220|Homo sapiens RELA protein protein. 33 1.4
AY455868-1|AAR13863.1| 534|Homo sapiens v-rel reticuloendotheli... 33 1.4
AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associate... 30 7.4
AK127504-1|BAC87010.1| 862|Homo sapiens protein ( Homo sapiens ... 30 7.4
AK124754-1|BAC85937.1| 893|Homo sapiens protein ( Homo sapiens ... 30 7.4
AC006530-1|AAD30180.1| 369|Homo sapiens protein ( Homo sapiens ... 30 7.4
>Z22948-1|CAA80524.2| 550|Homo sapiens p65 subunit of transcription
factor NF-kappaB protein.
Length = 550
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 56 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 86
>M62399-1|AAA36408.1| 551|Homo sapiens NF-kappa-B transcription
factor protein.
Length = 551
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 56 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 86
>L19067-1|AAA20946.1| 537|Homo sapiens NF-kappa-B transcription
factor subunit protein.
Length = 537
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 43 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 73
>BC110830-1|AAI10831.1| 377|Homo sapiens RELA protein protein.
Length = 377
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 56 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 86
>BC033522-1|AAH33522.1| 548|Homo sapiens RELA protein protein.
Length = 548
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 56 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 86
>BC014095-1|AAH14095.1| 246|Homo sapiens RELA protein protein.
Length = 246
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 56 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 86
>BC011603-1|AAH11603.1| 220|Homo sapiens RELA protein protein.
Length = 220
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 56 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 86
>AY455868-1|AAR13863.1| 534|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog A, nuclear
factor of kappa l protein.
Length = 534
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 324 KTRPLVKFGLYKAVYNNFLYLITKSPPHKPH 232
KT P +K Y + L+TK PPH+PH
Sbjct: 39 KTHPTIKINGYTGPGTVRISLVTKDPPHRPH 69
>AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associated
antigen SGA-72M protein.
Length = 1780
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 315 PLVKFGLYKAVYNNFLYLITKSPPHKPHIDISSSQNKIELLPIIWTRFL 169
PL+ + A + L IT++PP++P + + ++ E TRFL
Sbjct: 1114 PLITESAFDAGFEKLLKEITEAPPYQPQVSVREETHEKESSQSEQTRFL 1162
>AK127504-1|BAC87010.1| 862|Homo sapiens protein ( Homo sapiens
cDNA FLJ45597 fis, clone BRTHA3018409, weakly similar
to Mus musculus synaptotagmin-like 4 (Sytl4). ).
Length = 862
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 315 PLVKFGLYKAVYNNFLYLITKSPPHKPHIDISSSQNKIELLPIIWTRFL 169
PL+ + A + L IT++PP++P + + ++ E TRFL
Sbjct: 590 PLITESAFDAGFEKLLKEITEAPPYQPQVSVREETHEKESSQSEQTRFL 638
>AK124754-1|BAC85937.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ42764 fis, clone BRAWH3002821, moderately
similar to Mus musculus synaptotagmin-like 2 (Sytl2). ).
Length = 893
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 315 PLVKFGLYKAVYNNFLYLITKSPPHKPHIDISSSQNKIELLPIIWTRFL 169
PL+ + A + L IT++PP++P + + ++ E TRFL
Sbjct: 227 PLITESAFDAGFEKLLKEITEAPPYQPQVSVREETHEKESSQSEQTRFL 275
>AC006530-1|AAD30180.1| 369|Homo sapiens protein ( Homo sapiens
chromosome 14 clone BAC 316E14 map 14q24.3, complete
sequence. ).
Length = 369
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 698 FQSFDIHTHNDTSYHISADSLSKLVTLFVTNLN 600
FQ+ ++H + + ISAD SKL T F+ +L+
Sbjct: 295 FQALNMHYNKGNDFEISADHFSKLKTNFMQDLS 327
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,584,261
Number of Sequences: 237096
Number of extensions: 2474504
Number of successful extensions: 7171
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7171
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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