Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40349
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    77   5e-16
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   2.3  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.3  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       24   5.2  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    24   5.2  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   6.9  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   6.9  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   6.9  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   9.1  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 77.0 bits (181), Expect = 5e-16
 Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
 Frame = +2

Query: 335 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPT 511
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+    T
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 512 GSGKTLAYILPAIVH-INNQPPIR-RRDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 685
           GSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI      F H + ++ 
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLK- 279

Query: 686 TCV 694
            CV
Sbjct: 280 VCV 282


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 137 RRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDVYLNYGFF 6
           RR+ A+  A ++F          I+   YF D+V DV L Y  +
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALY 102


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -2

Query: 210 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 115
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 585 RLRIGGWLFMCTMAGKM*ANVLPEPVGTPTKF 490
           R R+ G++  C +A     + +P P  TP++F
Sbjct: 324 RTRLNGFIQHCYLAVSESGSGIPAPPDTPSEF 355


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = -3

Query: 611 PRPKQSDHHVSE*AVGYLCAQWLARCRPTFCRNPLVRQLN 492
           P    S+HH S     Y   Q  AR RP      L+RQLN
Sbjct: 136 PEYTLSNHHDSWGTFVYPQTQTFARNRPNVRYTFLLRQLN 175


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +2

Query: 278 HPTVLKRSPYEVEEYRHKHEVTVSGVEVH---NPIQYFEEANFPDYVQQGVKTMGYKE 442
           +P   +    E+E Y +    TVS V ++    PI+  EEA  P +   G +T   KE
Sbjct: 149 YPLDSQNCTVEIESYGY----TVSDVVMYWRSTPIRGVEEAELPQFTIIGYETNDRKE 202


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 99  WNHRFHGYYSNY 64
           W  R HGYY+NY
Sbjct: 197 WIIRPHGYYANY 208


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 287 VLKRSPYEVEEYRHKHEVTVSGVEVHNPIQY 379
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 507 QRVPAKRWPT 536
           QR+PA++WPT
Sbjct: 205 QRLPAQQWPT 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,143
Number of Sequences: 2352
Number of extensions: 14697
Number of successful extensions: 35
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)