Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40348
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   7.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.2  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.2  

>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 656 AKFENLVKRTERSKMKRMEE 715
           AKFE+L  RT R+  ++M+E
Sbjct: 144 AKFEHLRHRTMRAVKRKMDE 163


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 518 NYFYALPEDEEEYLTKEFSS-VYEDAQCERLSNMTKN 625
           NY   L E++EE   ++FS  +    + + + N+ KN
Sbjct: 206 NYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKN 242


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 227 CFSTMDGAPTTGDCVGSPSSMIRL 156
           CF  ++   TT DC G   S + L
Sbjct: 291 CFRCLERGHTTADCAGEDRSSLCL 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,865
Number of Sequences: 2352
Number of extensions: 11197
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)