Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40346
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065295-1|AAH65295.1|  208|Homo sapiens CCDC25 protein protein.       46   2e-04
BC049197-1|AAH49197.2|  208|Homo sapiens coiled-coil domain cont...    46   2e-04
BC032588-1|AAH32588.1|  140|Homo sapiens CCDC25 protein protein.       46   2e-04
AK027900-1|BAB55442.1|  208|Homo sapiens protein ( Homo sapiens ...    46   2e-04
AK001715-1|BAA91857.1|  140|Homo sapiens protein ( Homo sapiens ...    46   2e-04
BC054039-1|AAH54039.1|  177|Homo sapiens CCDC25 protein protein.       32   1.8  
BC006239-1|AAH06239.1|  105|Homo sapiens CCDC25 protein protein.       32   1.8  

>BC065295-1|AAH65295.1|  208|Homo sapiens CCDC25 protein protein.
          Length = 208

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 280 SYSTLMKAENMSTNYDGNDSDDFM 351
           SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 185 SYSSLMKVENMSSNQDGNDSDEFM 208



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  VAKRNNEIVNRLNKTKTESFP 154
           V K+ NEI+NRL KTK E FP
Sbjct: 122 VEKKVNEILNRLEKTKVERFP 142


>BC049197-1|AAH49197.2|  208|Homo sapiens coiled-coil domain
           containing 25 protein.
          Length = 208

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 280 SYSTLMKAENMSTNYDGNDSDDFM 351
           SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 185 SYSSLMKVENMSSNQDGNDSDEFM 208



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  VAKRNNEIVNRLNKTKTESFP 154
           V K+ NEI+NRL KTK E FP
Sbjct: 122 VEKKVNEILNRLEKTKVERFP 142


>BC032588-1|AAH32588.1|  140|Homo sapiens CCDC25 protein protein.
          Length = 140

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 280 SYSTLMKAENMSTNYDGNDSDDFM 351
           SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 117 SYSSLMKVENMSSNQDGNDSDEFM 140



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  VAKRNNEIVNRLNKTKTESFP 154
           V K+ NEI+NRL KTK E FP
Sbjct: 54  VEKKVNEILNRLEKTKVERFP 74


>AK027900-1|BAB55442.1|  208|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14994 fis, clone Y79AA1002125. ).
          Length = 208

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 280 SYSTLMKAENMSTNYDGNDSDDFM 351
           SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 185 SYSSLMKVENMSSNQDGNDSDEFM 208



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  VAKRNNEIVNRLNKTKTESFP 154
           V K+ NEI+NRL KTK E FP
Sbjct: 122 VEKKVNEILNRLEKTKVERFP 142


>AK001715-1|BAA91857.1|  140|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10853 fis, clone NT2RP4001502. ).
          Length = 140

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 280 SYSTLMKAENMSTNYDGNDSDDFM 351
           SYS+LMK ENMS+N DGNDSD+FM
Sbjct: 117 SYSSLMKVENMSSNQDGNDSDEFM 140



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  VAKRNNEIVNRLNKTKTESFP 154
           V K+ NEI+NRL KTK E FP
Sbjct: 54  VEKKVNEILNRLEKTKVERFP 74


>BC054039-1|AAH54039.1|  177|Homo sapiens CCDC25 protein protein.
          Length = 177

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  VAKRNNEIVNRLNKTKTESFP 154
           V K+ NEI+NRL KTK E FP
Sbjct: 122 VEKKVNEILNRLEKTKVERFP 142


>BC006239-1|AAH06239.1|  105|Homo sapiens CCDC25 protein protein.
          Length = 105

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 92  VAKRNNEIVNRLNKTKTESFP 154
           V K+ NEI+NRL KTK E FP
Sbjct: 54  VEKKVNEILNRLEKTKVERFP 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,725,253
Number of Sequences: 237096
Number of extensions: 1327998
Number of successful extensions: 2102
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2102
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)