Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40346
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052033-1|AAK93457.1|  427|Drosophila melanogaster LP01967p pro...    43   5e-04
AE014134-228|AAF51396.1|  427|Drosophila melanogaster CG4947-PA ...    43   5e-04
AY071614-1|AAL49236.1|  209|Drosophila melanogaster RE66240p pro...    41   0.002
AE014298-993|AAF46235.1|  209|Drosophila melanogaster CG4593-PA ...    41   0.002

>AY052033-1|AAK93457.1|  427|Drosophila melanogaster LP01967p
           protein.
          Length = 427

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = -1

Query: 615 QMRLMRTMRENIENGTFPAFGTTICERSLSQWPISYWVVNSLSSVGINL 469
           Q+RLMR+MRE I+   FP F      R     P+  W+  +LS+V I L
Sbjct: 346 QLRLMRSMREAIQRDEFPQFVADFMARHFKAEPVPAWIREALSAVNIQL 394


>AE014134-228|AAF51396.1|  427|Drosophila melanogaster CG4947-PA
           protein.
          Length = 427

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = -1

Query: 615 QMRLMRTMRENIENGTFPAFGTTICERSLSQWPISYWVVNSLSSVGINL 469
           Q+RLMR+MRE I+   FP F      R     P+  W+  +LS+V I L
Sbjct: 346 QLRLMRSMREAIQRDEFPQFVADFMARHFKAEPVPAWIREALSAVNIQL 394


>AY071614-1|AAL49236.1|  209|Drosophila melanogaster RE66240p
           protein.
          Length = 209

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 18/25 (72%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
 Frame = +1

Query: 280 SYSTLMKAENMSTNYD-GNDSDDFM 351
           SY++L K+ENM TNYD GN+SDDFM
Sbjct: 185 SYASLQKSENMRTNYDAGNESDDFM 209



 Score = 33.9 bits (74), Expect = 0.23
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +2

Query: 53  LVFKNECSTG*PKVAKRNNEIVNRLNKTKTE 145
           + + NE +    ++ KR NEIVNRLN+TKTE
Sbjct: 108 VAYHNEKAVRRIRLEKRINEIVNRLNRTKTE 138


>AE014298-993|AAF46235.1|  209|Drosophila melanogaster CG4593-PA
           protein.
          Length = 209

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 18/25 (72%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
 Frame = +1

Query: 280 SYSTLMKAENMSTNYD-GNDSDDFM 351
           SY++L K+ENM TNYD GN+SDDFM
Sbjct: 185 SYASLQKSENMRTNYDAGNESDDFM 209



 Score = 33.9 bits (74), Expect = 0.23
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +2

Query: 53  LVFKNECSTG*PKVAKRNNEIVNRLNKTKTE 145
           + + NE +    ++ KR NEIVNRLN+TKTE
Sbjct: 108 VAYHNEKAVRRIRLEKRINEIVNRLNRTKTE 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,536,616
Number of Sequences: 53049
Number of extensions: 404861
Number of successful extensions: 914
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)