Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40344
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 54 1e-07
02_05_0050 - 25430002-25430961 47 1e-05
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 46 4e-05
03_01_0655 + 4797516-4797624,4797716-4798485,4798988-4799049,479... 44 8e-05
02_05_0052 - 25433204-25434151 42 3e-04
10_06_0136 - 11114409-11114576,11114656-11114784,11114873-111150... 42 6e-04
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270... 32 0.36
05_07_0062 + 27423081-27423287,27423372-27423449,27423548-274235... 30 1.4
09_02_0623 - 11317468-11317471,11318393-11318948,11319072-11319156 29 2.5
09_02_0418 - 8926087-8926112,8926327-8926387,8926960-8927196 29 2.5
08_02_1037 - 23851750-23852132,23852622-23852784 29 2.5
07_03_0430 + 18150006-18151412 29 3.3
06_01_0928 - 7159857-7159922,7159923-7160024,7160126-7160206,716... 29 3.3
02_04_0167 - 20510507-20510955,20511058-20511262 29 3.3
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 29 4.4
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 29 4.4
02_05_0772 - 31643142-31643329,31643650-31643683,31644037-316442... 29 4.4
02_01_0090 - 637141-640263 28 5.8
03_05_0109 - 20903013-20903062,20903406-20903538,20903631-209037... 28 7.7
03_01_0429 - 3305676-3306131 28 7.7
02_03_0248 - 16820997-16821275,16821979-16822147,16822350-16822678 28 7.7
>03_06_0399 - 33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +3
Query: 258 DVILVATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPF 437
DVI+ TDG+FDN+ + A + A +P+ + A IA +A+ + D SPF
Sbjct: 1184 DVIIAGTDGLFDNLYSNEISAIVVEALRTGLEPE---ATAKKIAALAQQKAMDRNRQSPF 1240
Query: 438 AKSARQNGIDAIGGKPDDITVLLA 509
A +A++ G GGK DDITV+++
Sbjct: 1241 AAAAQEAGYRYFGGKLDDITVIVS 1264
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/78 (39%), Positives = 36/78 (46%)
Frame = +1
Query: 16 GSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQHYFNTPYQLSLPPPGHD 195
GSSTAC++ L E + A N+GDS S QQH FN YQL +
Sbjct: 1112 GSSTACIVAL--KEQGIHAVNLGDSGFIIVRDGRTVLRSPVQQHDFNFTYQL-------E 1162
Query: 196 RNVLSDRPESADTAEFPV 249
SD P SA T FPV
Sbjct: 1163 SGGGSDLPSSAQTFHFPV 1180
>02_05_0050 - 25430002-25430961
Length = 319
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +3
Query: 219 GISGHSRVSGGVDDVILVATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAW-M 395
G+ G +V G DV++ TDG+FDN+ + L ++ L P+ + + A+ M
Sbjct: 217 GMVGEMKVRRG--DVVVAGTDGLFDNMSDAELEKVVQIGTALGFSPKNMADIIGGTAYEM 274
Query: 396 ARNLSFDGCYMSPFAKSARQNGIDAIGGKPDDITVLLA 509
+R L D + + K GGK DDITV++A
Sbjct: 275 SRCLLKDSPFAVEWRKQHENEEGHFYGGKVDDITVVVA 312
Score = 34.7 bits (76), Expect = 0.067
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 16 GSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQHYFNTPYQL 171
G STA ++ L + +++R A IGDS S +QQ YFN PY L
Sbjct: 155 GGSTAVILSL-ADGNVLRWAYIGDSAFAVLRDGRVVVRSVQQQRYFNAPYYL 205
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Frame = +3
Query: 258 DVILVATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPF 437
D+I+ +DG FDN+ + +V+ + + G+ A ++A +AR S D + SP+
Sbjct: 203 DMIVSGSDGFFDNIFDQEIVSVISESPGV-------DEAAKALAELARKHSVDVTFDSPY 255
Query: 438 AKSARQNGIDA-----------IGGKPDDITVLLA 509
+ AR G D IGGK DDITV++A
Sbjct: 256 SMEARSRGFDVPSWKKFIGGKLIGGKMDDITVIVA 290
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 13 LGSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQHYFNTPYQLS 174
+GS+T + +L++ +++ A++GD + Q+HYF+ PYQLS
Sbjct: 129 VGSATVIIAMLEKT-GILKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQLS 181
>03_01_0655 +
4797516-4797624,4797716-4798485,4798988-4799049,
4799267-4799336,4799971-4800058,4801070-4801227,
4801316-4801459,4801561-4801689,4801797-4801964
Length = 565
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +3
Query: 258 DVILVATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPF 437
D I+ ATDG+FDNV E + A + ++ P + +A + A+ + SPF
Sbjct: 477 DAIVTATDGLFDNVYEEEIAAVISKSLEAGLKPSE---IAEFLVARAKEVGRSATCRSPF 533
Query: 438 AKSARQNG-IDAIGGKPDDITVLLAS*RYENV 530
+ +A G + GGK DD+TV+++ R V
Sbjct: 534 SDAALAVGYLGYSGGKLDDVTVVVSVVRKSEV 565
>02_05_0052 - 25433204-25434151
Length = 315
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +3
Query: 219 GISGHSRVSGGVD----DVILVATDGVFDNVPEPVL--VAEMRRAQGLAADPQKLQSVAN 380
G S S GGV+ DV++ TDG+FDNV L + M RA GL+ + A+
Sbjct: 214 GNSVTSAARGGVEVKEGDVVVAGTDGLFDNVTSEELQRIVAMGRALGLSP-----KQTAD 268
Query: 381 SIAWMARNLSFDGCYMSPFA-KSARQNGIDAIGGKPDDITVLLA 509
+A A S +PF+ +S ++ G GK DDITV++A
Sbjct: 269 VVAGFAYEASTTMGRDTPFSLESRKKQGTIFRRGKRDDITVVVA 312
Score = 31.1 bits (67), Expect = 0.82
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 16 GSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQHYFNTPYQLSL 177
G+STA +IL + ++ A IGDS S Q H FN P+QLS+
Sbjct: 160 GASTA--VILSLAGATLKYAYIGDSAFAVFRDGKLFFRSEAQVHSFNYPFQLSV 211
>10_06_0136 -
11114409-11114576,11114656-11114784,11114873-11115016,
11115130-11115299,11116441-11116528,11116590-11116652,
11116678-11116799,11118506-11118671
Length = 349
Score = 41.5 bits (93), Expect = 6e-04
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 DVILVATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPF 437
DVI+ A+DG+FDNV E VA M ++ L AD K +A +A A+ + +PF
Sbjct: 261 DVIVTASDGLFDNVYEQE-VATM-VSKSLQAD-LKPTEIAEHLAAKAQEVGRSAAGSTPF 317
Query: 438 AKSARQNG-IDAIGGKPDDITVLLA 509
+ +A G + GGK DDI V+++
Sbjct: 318 SDAALAVGYLGFSGGKLDDIAVVVS 342
>06_03_1067 -
27326167-27326295,27326572-27326656,27326993-27327033,
27327274-27327333,27327843-27327962,27328842-27329114,
27329186-27329257,27329798-27329860,27329957-27330139,
27330544-27330660,27330734-27332683,27332770-27332907,
27333003-27333284,27334650-27335522
Length = 1461
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 328 LISATSTGSGTL-SKTPSVATRITSSTPPETRLCPLIPAY-R*GRSCRVPEAVN 173
L+ + GSGTL + P +AT + T + P +P+Y +SC +P+AVN
Sbjct: 461 LMKTENPGSGTLKTDAPHIATEAPNKPVEATHVSPHLPSYVHQSKSC-IPKAVN 513
>05_07_0062 +
27423081-27423287,27423372-27423449,27423548-27423597,
27423714-27423767,27423965-27424017,27424101-27424173,
27424718-27424767,27424919-27424987,27425183-27425291,
27425658-27425725,27425982-27426082,27426260-27426412,
27426503-27426570,27426898-27426943,27427027-27427107
Length = 419
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -1
Query: 390 TQWSWLPTAASAGPRR----ALGPVSSLRPAQVRGHCRKLRPSPPGSHR 256
TQ W PT G RR ALG +SS RP + R PP S R
Sbjct: 11 TQPGWAPTTRGGGRRRPLALALGRLSSRRPVRCRCLAAMQTSPPPPSVR 59
>09_02_0623 - 11317468-11317471,11318393-11318948,11319072-11319156
Length = 214
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 335 GPSHLCDQHRFGDIVENS-VRRHQDHIVHSTGNSAVSADSGLSLRTFLSCPGGGKLNWYG 159
GPS++ D+ I +++ + + H + S S SGLSLR+F P GG+ N Y
Sbjct: 39 GPSYVDDRTNISYISDDAYIATGEKHEISSEYKSRALYTSGLSLRSF---PSGGR-NCYA 94
Query: 158 V 156
V
Sbjct: 95 V 95
>09_02_0418 - 8926087-8926112,8926327-8926387,8926960-8927196
Length = 107
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 447 RFLRMATYSNRRMRDCEPSTQWSWLPTAASAGPRRAL 337
++ R +++S + C S QW W+ + GPR ++
Sbjct: 41 QYFRESSWSRKLKETCIGSKQWRWITLLSIVGPRDSI 77
>08_02_1037 - 23851750-23852132,23852622-23852784
Length = 181
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 367 CSFCGSAASPWARLISATS-TGSGTLSKTPSVATRITSSTPPETRLCPLIP 218
C+ G A I+ S +GSG+ S TP T +S TPP T P P
Sbjct: 104 CTISGHCAGGMKLAINVGSGSGSGSGSGTPPSTTPGSSGTPPATPSSPSKP 154
>07_03_0430 + 18150006-18151412
Length = 468
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 272 HQDHIVHSTGNSAVSADSGLSLR-TFLSCPGG 180
H DH +H GN+A + +G R FLS P G
Sbjct: 29 HTDHNLHRLGNAAAATTAGSPRRLRFLSVPDG 60
>06_01_0928 -
7159857-7159922,7159923-7160024,7160126-7160206,
7160289-7160384,7160462-7160566,7160648-7160722,
7161372-7161431,7161960-7162090,7162175-7162250,
7163390-7163459,7163603-7163664,7163788-7163871,
7163973-7164047,7164448-7164585,7164733-7164791,
7164910-7165123,7167996-7168091,7168701-7169639
Length = 842
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 270 VATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPFAKSA 449
V T G FDN+ +RR GL A Q+L A + + R + + + + FA++A
Sbjct: 243 VMTPGRFDNM----YFVNLRRGLGLLATDQELYGDARTRPHVERYAANETAFFADFARAA 298
Query: 450 RQ 455
R+
Sbjct: 299 RR 300
>02_04_0167 - 20510507-20510955,20511058-20511262
Length = 217
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 154 NTPYQLSLPPPGHDRNVLSDRPESADTAEFPVEWT 258
N P ++S P GHD + +S P S A F WT
Sbjct: 150 NFPEEVSRPWQGHDVDHMSCSPPSISNARFLGSWT 184
>12_02_0228 + 15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = -3
Query: 415 SNERLRAIHAMELATDCSFCGSAASPWARLISATSTGSGTLSKTPSVAT------RITSS 254
SN L + + + SF +++P + + + + GSGT S TP+ A+ R+TS+
Sbjct: 828 SNSNLLSSEKVNPGSSPSFAFGSSAPGSSPVFSLAVGSGTTSATPASASSPIFCNRLTST 887
Query: 253 TPP 245
P
Sbjct: 888 NAP 890
>05_01_0168 +
1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 168 IEFTASGTRQERPQR*AGISGHSRVSGGVDDVILVATDGVFDNVPEPVLVAEMRR 332
IE+ + R E AG H + DV+ VA D +FD +P VA + R
Sbjct: 4 IEYVVAELRDEA----AGAGAHVAALAALCDVLAVAADHLFDALPIAEFVARLPR 54
>02_05_0772 -
31643142-31643329,31643650-31643683,31644037-31644221,
31644483-31645146
Length = 356
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 316 TSTGSGTLSKTPSVATRITSSTPPETRLCPLIPAYR*GRSCRVPE 182
+S+GSG T + +SS PP L P +PA R G C E
Sbjct: 313 SSSGSGGWRATAR-SIDDSSSRPPAVNLSPALPARRSGWGCHTAE 356
>02_01_0090 - 637141-640263
Length = 1040
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -3
Query: 511 DASSTVMSSGFPP-IASMPFCLAL---FANGDI*QPSNERLRAIHAMELATDCSFCGSAA 344
D SS V++ G P S P L + N P N LR+I+ ELA + CG
Sbjct: 558 DLSSNVLTGGIPENFGSSPALETLNLAYNNLTGPVPGNGVLRSINPDELAGNAGLCGGVL 617
Query: 343 SPWARLISATSTGSGTLSK 287
P + + ST +G S+
Sbjct: 618 PPCS---GSRSTAAGPRSR 633
>03_05_0109 -
20903013-20903062,20903406-20903538,20903631-20903726,
20904011-20904168,20904278-20904392,20904486-20904539,
20904818-20904925,20905406-20905495,20905907-20906086,
20906204-20906516,20906619-20906794
Length = 490
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 159 AIPIEFTAS-GTRQERPQR*AGISGHSRVSGGVDDVILVATDGVFDNVPEPVLVAEMRRA 335
A+ +FTA+ +E R A IS S V D + DG + E V E R
Sbjct: 303 ALQEQFTATKALEKEVKARKAKISDES-VEIMALDTKTIEWDGKVHEMEERVKAKEKERD 361
Query: 336 QGLAADPQKLQSVANSIAWMARNL 407
Q +A + QKL ++ + + W + L
Sbjct: 362 QIVADENQKLAALRSEVEWKLKCL 385
>03_01_0429 - 3305676-3306131
Length = 151
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 381 SWLPTAASAGPRRALGPVSSLRPAQVRGHCRKLRPSPP 268
SW A AG RR +GP SS P R C P P
Sbjct: 85 SWGSAVAVAGRRRLVGPGSS--PPTCRSRCGGCHPCRP 120
>02_03_0248 - 16820997-16821275,16821979-16822147,16822350-16822678
Length = 258
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/80 (25%), Positives = 31/80 (38%)
Frame = -1
Query: 510 MQVAP*CRLVFHL*HQCHFVWRFLRMATYSNRRMRDCEPSTQWSWLPTAASAGPRRALGP 331
M P C ++ V+R ++ + RR C P +W WLP RR+ GP
Sbjct: 63 MSCCPICMNLYFDLDDIELVFRGVKEEILTRRR---CVPGEKWCWLPIL----ERRSFGP 115
Query: 330 VSSLRPAQVRGHCRKLRPSP 271
+++ L SP
Sbjct: 116 AEITEWEELKKVIDNLETSP 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,436,901
Number of Sequences: 37544
Number of extensions: 433563
Number of successful extensions: 1437
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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