Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40344
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93785-4|CAB07860.1| 330|Caenorhabditis elegans Hypothetical pr... 77 9e-15
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 30 1.7
U39648-2|AAM15606.1| 166|Caenorhabditis elegans Hypothetical pr... 30 1.7
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 2.2
U39648-1|AAK39289.2| 162|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 3.0
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.0
AF067213-2|AAC16999.1| 225|Caenorhabditis elegans Hypothetical ... 29 3.0
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 29 3.9
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 29 3.9
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 29 3.9
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 29 3.9
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 29 3.9
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 28 5.2
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 5.2
U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical p... 28 5.2
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical ... 28 6.8
U58746-11|AAB00630.1| 314|Caenorhabditis elegans Hypothetical p... 27 9.1
AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical ... 27 9.1
AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical ... 27 9.1
AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z93785-4|CAB07860.1| 330|Caenorhabditis elegans Hypothetical
protein W09D10.4 protein.
Length = 330
Score = 77.4 bits (182), Expect = 9e-15
Identities = 39/83 (46%), Positives = 57/83 (68%)
Frame = +3
Query: 258 DVILVATDGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDGCYMSPF 437
D+IL+ATDGV+DN+ E ++ +++ L A +Q V N++A AR L+FD + SPF
Sbjct: 247 DIILLATDGVWDNLSEQQVLDQLK---ALDAGKSNVQEVCNALALTARRLAFDSKHNSPF 303
Query: 438 AKSARQNGIDAIGGKPDDITVLL 506
A AR++G A GGKPDDIT++L
Sbjct: 304 AMKAREHGFLAPGGKPDDITLVL 326
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +1
Query: 13 LGSSTACVMILDRNESLMRAANIGDSXXXXXXXXXXXXXSHEQQHYFNTPYQLSLPPPGH 192
+GSSTACV+++ + + + +AN+GDS S EQ HYFN P+QL+LPP G+
Sbjct: 168 VGSSTACVLVVHQEK--LYSANLGDSGFMVVRNGKIVSKSREQVHYFNAPFQLTLPPEGY 225
Query: 193 DRNVLSDRPESADTAEFPVE 252
+ + D+ + AD E V+
Sbjct: 226 -QGFIGDKADMADKDEMAVK 244
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = -1
Query: 537 TNRHFH-SATMQVAP*CRLVFHL*HQCHFVWRFLRM-ATYSNRRMRDCEPSTQWSWLPTA 364
TN +F S + VAP +++ +Q H + + A Y NRR+ + S +A
Sbjct: 305 TNWNFEMSGSSSVAPSNSRLYYSPNQMHMPMKGGGVSALYDNRRL--VQYSGDEEQYRSA 362
Query: 363 ASAGPRRALGPVSSLRPAQVRGHCRKLRPSPP 268
PR + PVS +P + + R ++PS P
Sbjct: 363 PKPAPRERIIPVSRQQPEIEQRNSRSMKPSEP 394
>U39648-2|AAM15606.1| 166|Caenorhabditis elegans Hypothetical
protein T13C5.7 protein.
Length = 166
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 372 PTAASAGPRRALGPVSSLRPAQVRGHCRKLRPSPP 268
PTAA AG ALG V +L P G C + PP
Sbjct: 76 PTAAEAGIEYALGAVLALFPFVPAGSCSTIVVCPP 110
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 316 TSTGSGTLSKTPSVATRITSSTPPETRLCPLIPA 215
TST + + PS T+ T+++PP T++ ++PA
Sbjct: 226 TSTTEKSTTAQPSTTTKPTTTSPPTTQVKTILPA 259
>U39648-1|AAK39289.2| 162|Caenorhabditis elegans Hypothetical
protein T13C5.3 protein.
Length = 162
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 372 PTAASAGPRRALGPVSSLRPAQVRGHCRKLRPSPP 268
PTAA AG ALG V +L P G C + PP
Sbjct: 72 PTAAEAGIEYALGAVIALFPFVPAGACSTVVVCPP 106
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 242 FRWSGRCDPGGDGRSFRQCPRTCAGRRDET 331
F WSG C G + ++F+ C TC T
Sbjct: 104 FYWSGCCGNGNNFQTFQTCQSTCEASSQTT 133
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 242 FRWSGRCDPGGDGRSFRQCPRTCAGRRDET 331
F WSG C G + ++F+ C TC T
Sbjct: 104 FYWSGCCGNGNNFQTFQTCQSTCEASSQTT 133
>AF067213-2|AAC16999.1| 225|Caenorhabditis elegans Hypothetical
protein T25B2.1 protein.
Length = 225
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 378 WLPTAASAGPRRALGPVSSLRPAQVRGHC 292
W PTAA AG LG V++L P G C
Sbjct: 137 WCPTAAEAGITYVLGFVNALLPFLPAGSC 165
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 279 DGVFDNVPEPVLVAEMRRAQGLAADPQKLQSVANSIAWMARNLSFDG 419
DG +DN+ E L+ E Q ++ DP K + WM L G
Sbjct: 13 DGDYDNLKE--LLREAVAIQSVSGDPSKRDETIRMVHWMKEKLETIG 57
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 DDVILVATDGVFDNVPEPVLVAEMRRAQGLAAD-PQKLQSVA 377
DDV+++ D D+ PEP+LV +M + + D P+ + +A
Sbjct: 11 DDVVMLDDDD--DDTPEPILVIDMDEDEDVTTDGPESQEELA 50
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 DDVILVATDGVFDNVPEPVLVAEMRRAQGLAAD-PQKLQSVA 377
DDV+++ D D+ PEP+LV +M + + D P+ + +A
Sbjct: 48 DDVVMLDDDD--DDTPEPILVIDMDEDEDVTTDGPESQEELA 87
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 DDVILVATDGVFDNVPEPVLVAEMRRAQGLAAD-PQKLQSVA 377
DDV+++ D D+ PEP+LV +M + + D P+ + +A
Sbjct: 48 DDVVMLDDDD--DDTPEPILVIDMDEDEDVTTDGPESQEELA 87
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 DDVILVATDGVFDNVPEPVLVAEMRRAQGLAAD-PQKLQSVA 377
DDV+++ D D+ PEP+LV +M + + D P+ + +A
Sbjct: 48 DDVVMLDDDD--DDTPEPILVIDMDEDEDVTTDGPESQEELA 87
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = -1
Query: 288 KLRPSPPGSHRPLHRKLGCVR*FRPIAEDVPVVSRRR*TQLVWRIKIVLLFV*AIDDTAA 109
K R PP + P K R P ED +SRR Q V ++ LL +DD
Sbjct: 487 KKRQPPPPAPAPQKAKASSARQNAPREEDDEYISRRDVPQAVVKVNNSLLRFDTVDDRVI 546
Query: 108 SYN 100
N
Sbjct: 547 PQN 549
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 319 ATSTGSGTLSKTPSVATRITSSTPPET 239
ATST S T S T S T T++ PP T
Sbjct: 962 ATSTSSSTESTTTSPTTSTTTTLPPTT 988
>U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical
protein C05D11.1 protein.
Length = 995
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 336 QGLAADPQKLQSVANSIAWMARNLSFDGCYMSPFAKSARQNG 461
QG+ DP ++ A +A AR+ DGC ++ A ++ G
Sbjct: 649 QGVVFDPSRIHQCAQKLAGEARDRKRDGCTVASTAVASMVYG 690
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 378 WLPTAASAGPRRALGPVSSLRPAQVRGHC 292
W PTAA AG LG ++++ P G C
Sbjct: 76 WCPTAAEAGIEYTLGLITAIFPFIPAGSC 104
>AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical
protein B0454.8 protein.
Length = 642
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = -2
Query: 476 TYSINAILSGAFCEWRHIATVE*EIASHPRNGVGYRLQLLRVRGEPLGPSHL-CDQHRFG 300
T +INA + A +W ++ + E + P + V LQ+ + GE P + CD
Sbjct: 129 TVTINAQCNTADMKWNYVTVINGETFTEPLDSVTC-LQVQNLPGEGPDPEPVACDP---- 183
Query: 299 DIVENSVRRHQ-DHIVHSTGNSAVSADSGLSLRTFLSCPGGGKLN 168
++ V Q + +SAV+ +G+S T ++C G N
Sbjct: 184 ALITYGVGDDQTPEVAIDVTHSAVTTTAGVSSMT-ITCSGADDFN 227
>U58746-11|AAB00630.1| 314|Caenorhabditis elegans Hypothetical
protein R05G6.1 protein.
Length = 314
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 332 PSHLCDQHRFGDIVENSVRRHQDHIVHST 246
PSH R G+ +ENS +R + H+ ST
Sbjct: 8 PSHCSTILRLGEQIENSHQRRKKHLTAST 36
>AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical
protein M70.3b protein.
Length = 886
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 328 LISATSTGSGTLSKTPSVATRITSSTPP 245
+ S+ TG+ T+SK P+ + +STPP
Sbjct: 743 VFSSGKTGNKTVSKGPAAVKKAQASTPP 770
>AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical
protein M70.3a protein.
Length = 915
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 328 LISATSTGSGTLSKTPSVATRITSSTPP 245
+ S+ TG+ T+SK P+ + +STPP
Sbjct: 772 VFSSGKTGNKTVSKGPAAVKKAQASTPP 799
>AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical
protein K12H6.11 protein.
Length = 402
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3
Query: 364 SFCGSAASPWARLISATSTGSGTLSKTPSVATRITSSTPPETRLCPLIP 218
+F S SP + LI ++ S TL ++ S + I++ T P+T PLIP
Sbjct: 15 TFTDSNISPTS-LIFSSKMSSRTL-RSSSSSNAISTKTQPKTEEAPLIP 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,240,851
Number of Sequences: 27780
Number of extensions: 352756
Number of successful extensions: 1101
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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