Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40343
         (610 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2 pr...    31   3.2  
AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2 pr...    31   3.2  
AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein prot...    31   3.2  
AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein.     31   3.2  
BC029832-1|AAH29832.1|  390|Homo sapiens ZYG11B protein protein.       30   5.5  
AB051517-1|BAB21821.1|  787|Homo sapiens KIAA1730 protein protein.     30   5.5  

>AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2
           protein.
          Length = 1096

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 253 YLGRLQIRRFSGEHKQLRELPQHRVPGQEVV 345
           Y+G+  +  F G HK  ++LP H V G +++
Sbjct: 372 YMGKHLLEAFKGSHKSGKQLPPHLVQGAKIL 402


>AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2
           protein.
          Length = 1096

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 253 YLGRLQIRRFSGEHKQLRELPQHRVPGQEVV 345
           Y+G+  +  F G HK  ++LP H V G +++
Sbjct: 372 YMGKHLLEAFKGSHKSGKQLPPHLVQGAKIL 402


>AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein
           protein.
          Length = 1099

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 253 YLGRLQIRRFSGEHKQLRELPQHRVPGQEVV 345
           Y+G+  +  F G HK  ++LP H V G +++
Sbjct: 372 YMGKHLLEAFKGSHKSGKQLPPHLVQGAKIL 402


>AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein.
          Length = 1114

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 253 YLGRLQIRRFSGEHKQLRELPQHRVPGQEVV 345
           Y+G+  +  F G HK  ++LP H V G +++
Sbjct: 385 YMGKHLLEAFKGSHKSGKQLPPHLVQGAKIL 415


>BC029832-1|AAH29832.1|  390|Homo sapiens ZYG11B protein protein.
          Length = 390

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 194 RHLWSGDGLQLLRRILE--PRDTSDGYRFVGFQENISNYENYHS 319
           RH     GL+L  R+LE  P ++S   + +G   NI+  +  HS
Sbjct: 179 RHFIENQGLELFMRVLESFPTESSIQQKVLGLLNNIAEVQELHS 222


>AB051517-1|BAB21821.1|  787|Homo sapiens KIAA1730 protein protein.
          Length = 787

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 194 RHLWSGDGLQLLRRILE--PRDTSDGYRFVGFQENISNYENYHS 319
           RH     GL+L  R+LE  P ++S   + +G   NI+  +  HS
Sbjct: 576 RHFIENQGLELFMRVLESFPTESSIQQKVLGLLNNIAEVQELHS 619


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,887,542
Number of Sequences: 237096
Number of extensions: 1937386
Number of successful extensions: 5091
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5081
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)