Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40341
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.6  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 56  RRHLGCHAEAVQRRAQRSHGVR 121
           RR +    EAV+   QR +G+R
Sbjct: 407 RRRVEAALEAVEEERQREYGIR 428


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 601 GPASKTRFSLPTVTSTRLPGSARN 530
           G  S T+F  P +  T+LP + R+
Sbjct: 74  GELSATKFGFPCLQYTQLPVNPRD 97


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 601 GPASKTRFSLPTVTSTRLPGSARN 530
           G  S T+F  P +  T+LP + R+
Sbjct: 74  GELSATKFGFPCLQYTQLPVNPRD 97


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 9   RTLCQYYQNPCNFVFEDVTLDVMLKQFKEGHK 104
           R LC+Y         ED   + +L+  K+G K
Sbjct: 325 RCLCEYLYKQLELHTEDRAAESILEPAKKGFK 356


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 144 GDPIYXTVGLLTLEDVIEEMIQAEIVDETDVFSDNRT 254
           GD    T  LL L+D+    I  +  D   VF+ NR+
Sbjct: 729 GDSSSGTTLLLELDDIASMEILYKPGDHLGVFACNRS 765


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,031
Number of Sequences: 438
Number of extensions: 3968
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)