Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40340
         (642 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q89UN7 Cluster: Bll1374 protein; n=12; Rhizobiales|Rep:...    33   5.9  

>UniRef50_Q89UN7 Cluster: Bll1374 protein; n=12; Rhizobiales|Rep:
           Bll1374 protein - Bradyrhizobium japonicum
          Length = 297

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = +3

Query: 216 FLLVVGPLVSPHERRHYPTYF-CREAV---MRFGLKGGAAVVTIL 338
           FL+V+GPL+    RRH P +    E++   +R+G+  GA VV ++
Sbjct: 150 FLIVLGPLIIEATRRHIPLFVESNESILTWLRYGITIGALVVALI 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,786,241
Number of Sequences: 1657284
Number of extensions: 10863471
Number of successful extensions: 16091
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 15770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16087
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)