Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40339
(610 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y07894-1|CAA69202.1| 552|Drosophila melanogaster mitochondrial ... 164 1e-40
BT003592-1|AAO39595.1| 552|Drosophila melanogaster HL08087p pro... 164 1e-40
AE013599-3468|AAF46903.1| 552|Drosophila melanogaster CG3612-PA... 164 1e-40
AJ012576-1|CAA10062.1| 601|Drosophila melanogaster zinc finger ... 31 1.2
AF181647-1|AAD55433.1| 601|Drosophila melanogaster ken protein. 31 1.2
AE013599-3711|AAF47084.1| 601|Drosophila melanogaster CG5575-PA... 31 1.2
AB010261-4|BAA32687.1| 601|Drosophila melanogaster ken protein. 31 1.2
AB010260-1|BAA32683.1| 601|Drosophila melanogaster ken protein. 31 1.2
AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA... 30 2.1
AY060752-1|AAL28300.1| 392|Drosophila melanogaster GH20310p pro... 28 8.7
AE013599-3708|AAF47081.1| 392|Drosophila melanogaster CG4585-PA... 28 8.7
AB010264-1|BAA32692.1| 392|Drosophila melanogaster protein ( Dr... 28 8.7
AB010261-6|BAA32689.1| 392|Drosophila melanogaster protein ( Dr... 28 8.7
>Y07894-1|CAA69202.1| 552|Drosophila melanogaster mitochondrial ATP
synthase alphasubunit precursor protein.
Length = 552
Score = 164 bits (398), Expect = 1e-40
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
SMKLELAQYREVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIE+QV +IYCG
Sbjct: 431 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCG 490
Query: 183 VRGHIDKLDPSKITAFEKEFTQHIK 257
VRGH+DK+DP+KIT FEKEF QHIK
Sbjct: 491 VRGHLDKMDPAKITKFEKEFLQHIK 515
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 254 QTSHQGLLSTIAKDGQITPESDASLKKIVNDFLATF 361
+TS Q LL TIAKDG I+ SDA LK IV F++TF
Sbjct: 515 KTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550
>BT003592-1|AAO39595.1| 552|Drosophila melanogaster HL08087p
protein.
Length = 552
Score = 164 bits (398), Expect = 1e-40
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
SMKLELAQYREVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIE+QV +IYCG
Sbjct: 431 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCG 490
Query: 183 VRGHIDKLDPSKITAFEKEFTQHIK 257
VRGH+DK+DP+KIT FEKEF QHIK
Sbjct: 491 VRGHLDKMDPAKITKFEKEFLQHIK 515
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 254 QTSHQGLLSTIAKDGQITPESDASLKKIVNDFLATF 361
+TS Q LL TIAKDG I+ SDA LK IV F++TF
Sbjct: 515 KTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550
>AE013599-3468|AAF46903.1| 552|Drosophila melanogaster CG3612-PA
protein.
Length = 552
Score = 164 bits (398), Expect = 1e-40
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
SMKLELAQYREVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIE+QV +IYCG
Sbjct: 431 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCG 490
Query: 183 VRGHIDKLDPSKITAFEKEFTQHIK 257
VRGH+DK+DP+KIT FEKEF QHIK
Sbjct: 491 VRGHLDKMDPAKITKFEKEFLQHIK 515
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 254 QTSHQGLLSTIAKDGQITPESDASLKKIVNDFLATF 361
+TS Q LL TIAKDG I+ SDA LK IV F++TF
Sbjct: 515 KTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550
>AJ012576-1|CAA10062.1| 601|Drosophila melanogaster zinc finger
protein protein.
Length = 601
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 245 SKFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 90
S+ L GSD G+ L VTA + LF +SH ++ L + S +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342
>AF181647-1|AAD55433.1| 601|Drosophila melanogaster ken protein.
Length = 601
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 245 SKFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 90
S+ L GSD G+ L VTA + LF +SH ++ L + S +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342
>AE013599-3711|AAF47084.1| 601|Drosophila melanogaster CG5575-PA
protein.
Length = 601
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 245 SKFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 90
S+ L GSD G+ L VTA + LF +SH ++ L + S +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342
>AB010261-4|BAA32687.1| 601|Drosophila melanogaster ken protein.
Length = 601
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 245 SKFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 90
S+ L GSD G+ L VTA + LF +SH ++ L + S +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342
>AB010260-1|BAA32683.1| 601|Drosophila melanogaster ken protein.
Length = 601
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 245 SKFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 90
S+ L GSD G+ L VTA + LF +SH ++ L + S +SS E
Sbjct: 292 SRTLGSGSDHSGIDLA-VTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPE 342
>AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA
protein.
Length = 1978
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = -3
Query: 140 HILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVLS 21
+I++L EE+++ S E L SG++V T G+S + T+LS
Sbjct: 1807 YIMALKEEMARNESRRE--LGSGLKVSTNQGQSAEQTILS 1844
>AY060752-1|AAL28300.1| 392|Drosophila melanogaster GH20310p
protein.
Length = 392
Score = 28.3 bits (60), Expect = 8.7
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 508 CIAFIWAVLNVDTIMECIYL 567
C+A++W ++NV ++ C+ L
Sbjct: 322 CVAWMWRIVNVHALLHCVLL 341
>AE013599-3708|AAF47081.1| 392|Drosophila melanogaster CG4585-PA
protein.
Length = 392
Score = 28.3 bits (60), Expect = 8.7
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 508 CIAFIWAVLNVDTIMECIYL 567
C+A++W ++NV ++ C+ L
Sbjct: 322 CVAWMWRIVNVHALLHCVLL 341
>AB010264-1|BAA32692.1| 392|Drosophila melanogaster protein (
Drosophila melanogastermRNA at 60A locus in chromosome
2R, complete cds. ).
Length = 392
Score = 28.3 bits (60), Expect = 8.7
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 508 CIAFIWAVLNVDTIMECIYL 567
C+A++W ++NV ++ C+ L
Sbjct: 322 CVAWMWRIVNVHALLHCVLL 341
>AB010261-6|BAA32689.1| 392|Drosophila melanogaster protein (
Drosophila melanogastergenes at 60A locus in chromosome
2R. ).
Length = 392
Score = 28.3 bits (60), Expect = 8.7
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 508 CIAFIWAVLNVDTIMECIYL 567
C+A++W ++NV ++ C+ L
Sbjct: 322 CVAWMWRIVNVHALLHCVLL 341
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,126,737
Number of Sequences: 53049
Number of extensions: 494274
Number of successful extensions: 1744
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -