Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40335
(766 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 7.2
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.5
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 21 9.5
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 202 YRSGDFDISDENEN 161
+RSGDF + DE +
Sbjct: 50 FRSGDFSLKDEKRS 63
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 95 NNNYNNYNKHNYNKL 109
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 328 NNNYNNYNKHNYNKL 342
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 233 NLQFYYYNKHGYNSI 277
N + YNKH YN +
Sbjct: 328 NNNYNNYNKHNYNKL 342
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 337 CEN*FCVCRKIS 302
CE C+CRK S
Sbjct: 74 CEKGVCICRKTS 85
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,214
Number of Sequences: 438
Number of extensions: 3281
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -