Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40334
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.56 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.1  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 9/51 (17%), Positives = 27/51 (52%)
 Frame = +1

Query: 502 GTNLNSVVNIIPCKNNDYEPVTPKSESQLDSDNEDRRTHLSKRKHLDSDDS 654
           G N+  ++    C NN+       + +Q D++ ++ + + + +K+ + +D+
Sbjct: 402 GANVKELIRNTHCVNNNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQNDN 452


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 149 PVDWFWISPGI 117
           P DW WI P I
Sbjct: 384 PADWLWIVPPI 394


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 288 LGKNTSQFSTSLAGKK*FLHHKSRLRSRAMF 196
           LG N + F T+L G    + H+S   + A F
Sbjct: 163 LGNNLTAFLTTLDGVNDVVQHQSGSEAEAEF 193


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 15  IPEEANEVQFPEQFLDISSLPVVIGGLTSAAAL 113
           IP+E NE+   + +L     P+  G LT++  +
Sbjct: 15  IPDEKNEMYPKDPYLYYDFYPLERGELTNSGKM 47


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 15  IPEEANEVQFPEQFLDISSLPVVIGGLTSAAAL 113
           IP+E NE+   + +L     P+  G LT++  +
Sbjct: 30  IPDEKNEMYPKDPYLYYDFYPLERGELTNSGKM 62


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 184 QTHKKHCP*PKTT 222
           QTH + CP P++T
Sbjct: 376 QTHSQLCPTPRST 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,491
Number of Sequences: 438
Number of extensions: 4542
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)