Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40331
(542 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 27 0.40
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 27 0.40
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 27 0.40
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 27 0.53
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 1.2
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 25 1.6
AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding pr... 25 2.1
AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding pr... 24 2.8
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 24 3.7
AY745234-1|AAU93513.1| 96|Anopheles gambiae thioredoxin-depend... 23 4.9
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 23 6.5
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 23 8.6
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 27.1 bits (57), Expect = 0.40
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 215 TVTGQYAYVAPDGSTTLSLSQRDPTASNPKP 307
TVT A VAP +TT + + PT + P P
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPP 143
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 27.1 bits (57), Expect = 0.40
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 215 TVTGQYAYVAPDGSTTLSLSQRDPTASNPKP 307
TVT A VAP +TT + + PT + P P
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPP 143
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 27.1 bits (57), Expect = 0.40
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 215 TVTGQYAYVAPDGSTTLSLSQRDPTASNPKP 307
TVT A VAP +TT + + PT + P P
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPP 143
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 26.6 bits (56), Expect = 0.53
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 215 TVTGQYAYVAPDGSTTLSLSQRDPTASNPKP 307
T+T A VAP +TT + + PT + P P
Sbjct: 113 TITRTKATVAPKSTTTTTTTTVKPTTTTPPP 143
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 25.4 bits (53), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 105 TATWNPXATALRTKLV 152
TA+W ATALRTK V
Sbjct: 577 TASWQAIATALRTKRV 592
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.0 bits (52), Expect = 1.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 105 TATWNPXATALRTKLVTVHPDKRKVNWTT 191
TA+W A ALR+K V K +W T
Sbjct: 597 TASWKSIAMALRSKEVPASLQKLLQHWMT 625
>AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding
protein AgamOBP33 protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 5 TKMLKYVTVACVLVA 49
T LKY+T+ACVL A
Sbjct: 3 TIKLKYITLACVLAA 17
>AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding
protein AgamOBP32 protein.
Length = 320
Score = 24.2 bits (50), Expect = 2.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 14 LKYVTVACVLVA 49
LKY+T+ACVL A
Sbjct: 6 LKYITLACVLAA 17
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 23.8 bits (49), Expect = 3.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 406 RSLSCLQNHCLTYVETEYYLCTQVFGVFTS 317
++L+ LQNH T+ T+ + C FT+
Sbjct: 165 KTLASLQNHVNTHTGTKPHRCKHCDNCFTT 194
>AY745234-1|AAU93513.1| 96|Anopheles gambiae thioredoxin-dependent
peroxidase protein.
Length = 96
Score = 23.4 bits (48), Expect = 4.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 176 GKLDNPQSENAALTVTGQYAYVAPDGSTTLSLSQRDP 286
GKL+ P + ++ Y + PDG + L DP
Sbjct: 14 GKLEYPLLADLTKRISADYGVLLPDGISLRGLFIIDP 50
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 23.0 bits (47), Expect = 6.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 215 TVTGQYAYVAPDGSTTLSLSQRDPTASNPKP 307
TVT A VAP +TT + + PT + P P
Sbjct: 113 TVTRTKATVAPKSTTTTTTVK--PTTTTPPP 141
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 22.6 bits (46), Expect = 8.6
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +2
Query: 68 QQNPQDVQILRFDSNVEPXGYSFAYETSDGTSRQEEGKLDNPQSE 202
Q PQ ++ S+ F E D T EE NP E
Sbjct: 315 QHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSPQNPDDE 359
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,639
Number of Sequences: 2352
Number of extensions: 12271
Number of successful extensions: 27
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -