Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40331
         (542 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC059404-1|AAH59404.1|  480|Homo sapiens B-cell CLL/lymphoma 6, ...    32   1.1  
AB076581-1|BAC00963.1|  480|Homo sapiens BAZF protein.                 32   1.1  
AB076580-1|BAC00962.1|  480|Homo sapiens BAZF protein.                 32   1.1  
AK092627-1|BAC03928.1|  235|Homo sapiens protein ( Homo sapiens ...    31   2.6  
AK127496-1|BAC87007.1| 1375|Homo sapiens protein ( Homo sapiens ...    29   8.0  

>BC059404-1|AAH59404.1|  480|Homo sapiens B-cell CLL/lymphoma 6,
           member B (zinc finger protein) protein.
          Length = 480

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 146 TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGSTTLSLSQRDPTASNP 301
           +S  +S  EEG +  PQS  +    T Q+   AP  +  L  SQ   T+ +P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289


>AB076581-1|BAC00963.1|  480|Homo sapiens BAZF protein.
          Length = 480

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 146 TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGSTTLSLSQRDPTASNP 301
           +S  +S  EEG +  PQS  +    T Q+   AP  +  L  SQ   T+ +P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289


>AB076580-1|BAC00962.1|  480|Homo sapiens BAZF protein.
          Length = 480

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 146 TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGSTTLSLSQRDPTASNP 301
           +S  +S  EEG +  PQS  +    T Q+   AP  +  L  SQ   T+ +P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289


>AK092627-1|BAC03928.1|  235|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35308 fis, clone PROST2009909, weakly similar to
           ADAM 12 PRECURSOR (EC 3.4.24.-). ).
          Length = 235

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
 Frame = +2

Query: 35  CVLVALCSGAPQQNPQDVQILRFDSNVEPXGYSFAYETSDGTSRQEEGKLDNPQSENAAL 214
           C L   C+G     P DV +L  D +    G  + ++ +  T  Q+  +L  P     A 
Sbjct: 35  CDLPEFCTGTSSHCPPDVYLL--DGSPCARGSGYCWDGACPTLEQQCQQLWGPGERTRAP 92

Query: 215 T------VTGQYAYVAPDGSTTLSLSQRDPTASNPKP 307
                  + G   Y   DG   L  ++R P+ S P+P
Sbjct: 93  LHPAPHPLVGPVFYCGEDGQGKLRPAERSPSPSCPQP 129


>AK127496-1|BAC87007.1| 1375|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45589 fis, clone BRTHA3014547, weakly  similar
           to Ankyrin 1. ).
          Length = 1375

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 251 RQELRKHTVQ*LSELHSRTVGCPVYLPLV 165
           RQ L K T + L++LH ++ GC +YL  V
Sbjct: 227 RQHLTKETAEMLNQLHIKSSGCFLYLERV 255


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,176,982
Number of Sequences: 237096
Number of extensions: 1778723
Number of successful extensions: 5902
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5901
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)