Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40328
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 134 3e-31
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 133 8e-31
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 133 8e-31
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 132 1e-30
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 121 3e-27
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 120 6e-27
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 120 6e-27
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 84 5e-16
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 84 5e-16
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 84 5e-16
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 84 5e-16
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 84 5e-16
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 83 1e-15
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 83 1e-15
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 51 4e-06
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 51 4e-06
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 51 4e-06
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 51 4e-06
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 48 3e-05
D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein. 31 4.7
BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating mol... 31 4.7
AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating mol... 31 4.7
AF132596-1|AAD22110.1| 436|Homo sapiens origin recognition comp... 31 6.3
AF047598-1|AAC80282.1| 436|Homo sapiens origin recognition comp... 31 6.3
AF022108-1|AAC01957.1| 436|Homo sapiens putative replication in... 31 6.3
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 134 bits (325), Expect = 3e-31
Identities = 78/169 (46%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Frame = +1
Query: 253 FAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
+AQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y +VDIRELI +DD
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMVDIRELIEVDDV 63
Query: 433 MEDEELQFGPNGGLVFCIETLLENSAG*RSNLEMLM--MITFYLTVQDRL-SYTPICRL* 603
MED+ L+FGPNGGLVFC+E N + L + I F Q L ++ P+ +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQL 123
Query: 604 EDWLICFRIGTLGYV*CS*WTRVHD*WCKFLSGTMAALSVMVNLELPHV 750
L + G V KF+SG +AALS M++LE+P V
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVES--FKFISGILAALSAMISLEIPQV 170
Score = 97.5 bits (232), Expect = 5e-20
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +3
Query: 504 FCWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSRS*LM 683
F WLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C VFLVDS+ M
Sbjct: 88 FDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQ--FM 145
Query: 684 VQIFIRYNGCI 716
V+ F +G +
Sbjct: 146 VESFKFISGIL 156
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 133 bits (321), Expect = 8e-31
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Frame = +1
Query: 253 FAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
+AQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 433 MEDEELQFGPNGGLVFCIETLLENSAG*RSNLEMLM--MITFYLTVQDRL-SYTPICRL* 603
MED+ L+FGPNGGLVFC+E N + L + I F Q L ++ P+ +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQL 123
Query: 604 EDWLICFRIGTLGYV*CS*WTRVHD*WCKFLSGTMAALSVMVNLELPHV 750
L + G V KF+SG +AALS M++LE+P V
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVES--FKFISGILAALSAMISLEIPQV 170
Score = 97.5 bits (232), Expect = 5e-20
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +3
Query: 504 FCWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSRS*LM 683
F WLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C VFLVDS+ M
Sbjct: 88 FDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQ--FM 145
Query: 684 VQIFIRYNGCI 716
V+ F +G +
Sbjct: 146 VESFKFISGIL 156
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 133 bits (321), Expect = 8e-31
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Frame = +1
Query: 253 FAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
+AQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 433 MEDEELQFGPNGGLVFCIETLLENSAG*RSNLEMLM--MITFYLTVQDRL-SYTPICRL* 603
MED+ L+FGPNGGLVFC+E N + L + I F Q L ++ P+ +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQL 123
Query: 604 EDWLICFRIGTLGYV*CS*WTRVHD*WCKFLSGTMAALSVMVNLELPHV 750
L + G V KF+SG +AALS M++LE+P V
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVES--FKFISGILAALSAMISLEIPQV 170
Score = 97.5 bits (232), Expect = 5e-20
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +3
Query: 504 FCWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSRS*LM 683
F WLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C VFLVDS+ M
Sbjct: 88 FDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQ--FM 145
Query: 684 VQIFIRYNGCI 716
V+ F +G +
Sbjct: 146 VESFKFISGIL 156
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 132 bits (320), Expect = 1e-30
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Frame = +1
Query: 253 FAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
+AQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 433 MEDEELQFGPNGGLVFCIETLLENSAG*RSNLEMLM--MITFYLTVQDRL-SYTPICRL* 603
MED+ L+FGPNGGLVFC+E N + L + I F Q L ++ P+ +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKHL 123
Query: 604 EDWLICFRIGTLGYV*CS*WTRVHD*WCKFLSGTMAALSVMVNLELPHV 750
L + G V KF+SG +AALS M++LE+P V
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVES--FKFISGILAALSAMISLEIPQV 170
Score = 97.1 bits (231), Expect = 6e-20
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = +3
Query: 504 FCWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSRS*LM 683
F WLE LG V+DDYILFDCPGQIELYTHLPVM+ LV L+ W FR+C VFLVDS+ M
Sbjct: 88 FDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKHLVQQLEQWEFRVCGVFLVDSQ--FM 145
Query: 684 VQIFIRYNGCI 716
V+ F +G +
Sbjct: 146 VESFKFISGIL 156
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 121 bits (292), Expect = 3e-27
Identities = 77/179 (43%), Positives = 101/179 (56%), Gaps = 13/179 (7%)
Frame = +1
Query: 253 FAQLIVGPAGSGK----------STYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVD 402
+AQL++GPAGSGK STYC+T+V+H R V VVNLDPAAEHF+Y + D
Sbjct: 24 YAQLVMGPAGSGKVRICGDKERKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMAD 83
Query: 403 IRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEMLM--MITFYLTVQDRL 576
IRELI +DD MED+ L+FGPNGGLVFC+E N + L + I F Q L
Sbjct: 84 IRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIEL 143
Query: 577 -SYTPICRL*EDWLICFRIGTLGYV*CS*WTRVHD*WCKFLSGTMAALSVMVNLELPHV 750
++ P+ + L + G V KF+SG +AALS M++LE+P V
Sbjct: 144 YTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVES--FKFISGILAALSAMISLEIPQV 200
Score = 97.5 bits (232), Expect = 5e-20
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +3
Query: 504 FCWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSRS*LM 683
F WLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C VFLVDS+ M
Sbjct: 118 FDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQ--FM 175
Query: 684 VQIFIRYNGCI 716
V+ F +G +
Sbjct: 176 VESFKFISGIL 186
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 120 bits (289), Expect = 6e-27
Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Frame = +1
Query: 253 FAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
+A ++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 4 YAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 433 MEDEELQFGPNGGLVFCIETLLENSAG*RSNLEMLM--MITFYLTVQDRL-SYTPICRL* 603
MED+ L+FGPNGGLVFC+E N + L + I F Q L ++ P+ +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQL 123
Query: 604 EDWLICFRIGTLGYV*CS*WTRVHD*WCKFLSGTMAALSVMVNLELPHV 750
L + G V KF+SG +AALS M++LE+P V
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVES--FKFISGILAALSAMISLEIPQV 170
Score = 97.5 bits (232), Expect = 5e-20
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +3
Query: 504 FCWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSRS*LM 683
F WLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C VFLVDS+ M
Sbjct: 88 FDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQ--FM 145
Query: 684 VQIFIRYNGCI 716
V+ F +G +
Sbjct: 146 VESFKFISGIL 156
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 120 bits (289), Expect = 6e-27
Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Frame = +1
Query: 253 FAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
+A ++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 4 YAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 433 MEDEELQFGPNGGLVFCIETLLENSAG*RSNLEMLM--MITFYLTVQDRL-SYTPICRL* 603
MED+ L+FGPNGGLVFC+E N + L + I F Q L ++ P+ +
Sbjct: 64 MEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQL 123
Query: 604 EDWLICFRIGTLGYV*CS*WTRVHD*WCKFLSGTMAALSVMVNLELPHV 750
L + G V KF+SG +AALS M++LE+P V
Sbjct: 124 VQQLEQWEFRVCGVFLVDSQFMVES--FKFISGILAALSAMISLEIPQV 170
Score = 97.5 bits (232), Expect = 5e-20
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +3
Query: 504 FCWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDSRS*LM 683
F WLE LG V+DDYILFDCPGQIELYTHLPVM++LV L+ W FR+C VFLVDS+ M
Sbjct: 88 FDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQ--FM 145
Query: 684 VQIFIRYNGCI 716
V+ F +G +
Sbjct: 146 VESFKFISGIL 156
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 84.2 bits (199), Expect = 5e-16
Identities = 45/96 (46%), Positives = 59/96 (61%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 429
AF Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 9 AFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGD 68
Query: 430 AMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEML 537
M + L+ GPNGGL++C+E L N R+ L+ L
Sbjct: 69 VM--DALRLGPNGGLLYCMEYLEANLDWLRAKLDPL 102
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 510 WLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDS 668
WL +L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS
Sbjct: 94 WLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDS 146
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 84.2 bits (199), Expect = 5e-16
Identities = 45/96 (46%), Positives = 59/96 (61%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 429
AF Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 9 AFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGD 68
Query: 430 AMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEML 537
M + L+ GPNGGL++C+E L N R+ L+ L
Sbjct: 69 VM--DALRLGPNGGLLYCMEYLEANLDWLRAKLDPL 102
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 510 WLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDS 668
WL +L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS
Sbjct: 94 WLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDS 146
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 84.2 bits (199), Expect = 5e-16
Identities = 45/96 (46%), Positives = 59/96 (61%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 429
AF Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 9 AFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGD 68
Query: 430 AMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEML 537
M + L+ GPNGGL++C+E L N R+ L+ L
Sbjct: 69 VM--DALRLGPNGGLLYCMEYLEANLDWLRAKLDPL 102
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 510 WLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDS 668
WL +L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS
Sbjct: 94 WLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDS 146
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 84.2 bits (199), Expect = 5e-16
Identities = 45/96 (46%), Positives = 59/96 (61%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 429
AF Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 9 AFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGD 68
Query: 430 AMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEML 537
M + L+ GPNGGL++C+E L N R+ L+ L
Sbjct: 69 VM--DALRLGPNGGLLYCMEYLEANLDWLRAKLDPL 102
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 510 WLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDS 668
WL +L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS
Sbjct: 94 WLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDS 146
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 84.2 bits (199), Expect = 5e-16
Identities = 45/96 (46%), Positives = 59/96 (61%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 429
AF Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 9 AFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGD 68
Query: 430 AMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEML 537
M + L+ GPNGGL++C+E L N R+ L+ L
Sbjct: 69 VM--DALRLGPNGGLLYCMEYLEANLDWLRAKLDPL 102
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 510 WLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDS 668
WL +L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS
Sbjct: 94 WLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDS 146
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 83.0 bits (196), Expect = 1e-15
Identities = 45/96 (46%), Positives = 58/96 (60%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 429
AF Q + GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 9 AFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGD 68
Query: 430 AMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEML 537
M + L+ GPNGGL++C+E L N R+ L+ L
Sbjct: 69 VM--DALRLGPNGGLLYCMEYLEANLDWLRAKLDPL 102
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 510 WLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDS 668
WL +L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS
Sbjct: 94 WLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDS 146
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 83.0 bits (196), Expect = 1e-15
Identities = 45/96 (46%), Positives = 58/96 (60%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 429
AF Q + GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 9 AFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGD 68
Query: 430 AMEDEELQFGPNGGLVFCIETLLENSAG*RSNLEML 537
M + L+ GPNGGL++C+E L N R+ L+ L
Sbjct: 69 VM--DALRLGPNGGLLYCMEYLEANLDWLRAKLDPL 102
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 510 WLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLLQNWNFRICVVFLVDS 668
WL +L + Y LFDCPGQ+EL TH +R + + W+ R+ V LVDS
Sbjct: 94 WLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDS 146
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 262 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 441
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 442 EELQFGPNGGLV 477
L GPNGG+V
Sbjct: 83 YGL--GPNGGIV 92
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 262 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 441
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 7 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 66
Query: 442 EELQFGPNGGLV 477
L GPNGG+V
Sbjct: 67 YGL--GPNGGIV 76
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 262 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 441
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 442 EELQFGPNGGLV 477
L GPNGG+V
Sbjct: 83 YGL--GPNGGIV 92
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 262 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 441
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 442 EELQFGPNGGLV 477
L GPNGG+V
Sbjct: 83 YGL--GPNGGIV 92
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 48.4 bits (110), Expect = 3e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +1
Query: 250 AFAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYE 390
AF Q ++GP GSGK+TYC + + R V VVNLDPA E Y+
Sbjct: 9 AFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYD 55
>D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein.
Length = 407
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 489 DPLREFCWLEEQLGDVDDDYILF--DC 563
D L FCW + G+V+DD I+F DC
Sbjct: 54 DSLIHFCWKDRTSGNVEDDLIIFPDDC 80
>BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 489 DPLREFCWLEEQLGDVDDDYILF--DC 563
D L FCW + G+V+DD I+F DC
Sbjct: 54 DSLIHFCWKDRTSGNVEDDLIIFPDDC 80
>AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 489 DPLREFCWLEEQLGDVDDDYILF--DC 563
D L FCW + G+V+DD I+F DC
Sbjct: 54 DSLIHFCWKDRTSGNVEDDLIIFPDDC 80
>AF132596-1|AAD22110.1| 436|Homo sapiens origin recognition complex
subunit 4 protein.
Length = 436
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 262 LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
LI+GP GSGK+ S +K M+ + + V V+L+ + D L +I ++L++
Sbjct: 64 LIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENV 123
Query: 433 MEDEEL-QFGPNGGLVFCIETL 495
+ D+ F N L F +E L
Sbjct: 124 VGDKVFGSFAEN--LSFLLEAL 143
>AF047598-1|AAC80282.1| 436|Homo sapiens origin recognition complex
subunit 4 protein.
Length = 436
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 262 LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
LI+GP GSGK+ S +K M+ + + V V+L+ + D L +I ++L++
Sbjct: 64 LIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENV 123
Query: 433 MEDEEL-QFGPNGGLVFCIETL 495
+ D+ F N L F +E L
Sbjct: 124 VGDKVFGSFAEN--LSFLLEAL 143
>AF022108-1|AAC01957.1| 436|Homo sapiens putative replication
initiator origin recognition complex subunit Orc4Lp
protein.
Length = 436
Score = 30.7 bits (66), Expect = 6.3
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 262 LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEHFDYEPLVDIRELIHLDDA 432
LI+GP GSGK+ S +K M+ + + V V+L+ + D L +I ++L++
Sbjct: 64 LIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENV 123
Query: 433 MEDEEL-QFGPNGGLVFCIETL 495
+ D+ F N L F +E L
Sbjct: 124 VGDKVFGSFAEN--LSFLLEAL 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,217,055
Number of Sequences: 237096
Number of extensions: 2246951
Number of successful extensions: 4256
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4244
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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