Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40323
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    35   1.8  
UniRef50_Q22SD4 Cluster: Putative uncharacterized protein; n=2; ...    33   5.6  

>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -1

Query: 404 KNQVYVLV*IYLNAYMYVFKYLVSALDKSQLSR 306
           KN  Y  +  YLN Y+Y+F YL   L+K+++S+
Sbjct: 479 KNNQYCYIYFYLNKYIYIFIYLFVILNKNRISK 511


>UniRef50_Q22SD4 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 4616

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 16/69 (23%), Positives = 35/69 (50%)
 Frame = +1

Query: 166  EEKN*IVKFEKMKKYIHTYRKRHVAGVNEIERLEKSISFQIPYTHIALDNWLLSNAETRY 345
            ++ N I +F+ +   +   +K  V  V  I+ L+++++   PY       + +++ E + 
Sbjct: 4265 KQNNIIQEFQSLVDSVSRTQKNMVIKVKTIQHLDENLNILKPYKETIFRKYFMNSPEYKE 4324

Query: 346  LNTYIYAFK 372
             NTYI+  K
Sbjct: 4325 GNTYIFDLK 4333


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,966,939
Number of Sequences: 1657284
Number of extensions: 10291221
Number of successful extensions: 24348
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24287
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)