Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40323
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +1

Query: 1   FFMKAFLLVFLYFIFCTFFLLSI 69
           F +  F L+ +Y+ +C F + ++
Sbjct: 136 FVVPLFFLLCIYYFYCAFIIFTV 158



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 16  FLLVFLYFIFCTFFLLSI 69
           FLL   YF+   FFLL I
Sbjct: 129 FLLCIYYFVVPLFFLLCI 146


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 456  WYPGTKYMYLMYSFSPDLSVGRVSDP 533
            +YPG  Y Y   +FS +  + + +DP
Sbjct: 2531 YYPGDVYDYFNANFSLNYWIEKGADP 2556


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,481
Number of Sequences: 336
Number of extensions: 2872
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)