Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40322
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.8  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 476 AATTETEEGVHDV 438
           AATTE E G HD+
Sbjct: 366 AATTEREGGYHDI 378


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 476 AATTETEEGVHDV 438
           AATTE E G HD+
Sbjct: 366 AATTEREGGYHDI 378


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 452 LPPFRSSPLICEVTAI 499
           LP F+  PL+C V+ +
Sbjct: 217 LPKFKKKPLLCVVSTL 232


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 330 SEPGRNVWPWDRSQQRRRTAGRER 259
           SEP  N +PW ++       G +R
Sbjct: 162 SEPPANFYPWMKAHGDSSATGNKR 185


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 330 SEPGRNVWPWDRSQQRRRTAGRER 259
           SEP  N +PW ++       G +R
Sbjct: 162 SEPPANFYPWMKAHGDSSATGNKR 185


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 547 TLILVFTLFRPKHNKKFLFLINK 615
           TL+ V++LFR   N+    +INK
Sbjct: 66  TLLSVYSLFRIATNENNSLVINK 88


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 547 TLILVFTLFRPKHNKKFLFLINK 615
           TL+ V++LFR   N+    +INK
Sbjct: 66  TLLSVYSLFRIATNENNSLVINK 88


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 330 SEPGRNVWPWDRSQQRRRTAGRER 259
           SEP  N +PW ++       G +R
Sbjct: 162 SEPPANFYPWMKAHGDSSATGNKR 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,254
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)