Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40320
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b ...    51   4e-06
D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.               51   4e-06
BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome, ma...    51   4e-06
AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome, ma...    51   4e-06
AL161911-6|CAI95117.1|  157|Homo sapiens proteasome (prosome, ma...    39   0.022
BC050356-1|AAH50356.2|  192|Homo sapiens RNF212 protein protein.       34   0.61 
BC101260-1|AAI01261.1|  297|Homo sapiens RNF212 protein protein.       33   0.81 
BC101259-1|AAI01260.1|  232|Homo sapiens ring finger protein 212...    33   0.81 
BC101258-1|AAI01259.1|  232|Homo sapiens ring finger protein 212...    33   0.81 
AK096160-1|BAC04714.1|  232|Homo sapiens protein ( Homo sapiens ...    33   0.81 

>S79862-1|AAB35397.1|  504|Homo sapiens 26 S protease subunit 5b
           protein.
          Length = 504

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 19/73 (26%), Positives = 42/73 (57%)
 Frame = +1

Query: 505 AGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           +G +  +++E+   DVL +   +E++++LA   +G  YL   G +D++  +++   + P 
Sbjct: 206 SGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPF 265

Query: 685 GGILIPGYMKLFG 723
               +PG++K FG
Sbjct: 266 SSFYLPGFVKFFG 278


>D31889-1|BAA06687.1|  503|Homo sapiens KIAA0072 protein.
          Length = 503

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 19/73 (26%), Positives = 42/73 (57%)
 Frame = +1

Query: 505 AGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           +G +  +++E+   DVL +   +E++++LA   +G  YL   G +D++  +++   + P 
Sbjct: 205 SGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPF 264

Query: 685 GGILIPGYMKLFG 723
               +PG++K FG
Sbjct: 265 SSFYLPGFVKFFG 277


>BC014478-1|AAH14478.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 19/73 (26%), Positives = 42/73 (57%)
 Frame = +1

Query: 505 AGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           +G +  +++E+   DVL +   +E++++LA   +G  YL   G +D++  +++   + P 
Sbjct: 206 SGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPF 265

Query: 685 GGILIPGYMKLFG 723
               +PG++K FG
Sbjct: 266 SSFYLPGFVKFFG 278


>AL161911-7|CAI95118.1|  504|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 504

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 19/73 (26%), Positives = 42/73 (57%)
 Frame = +1

Query: 505 AGYIDIMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           +G +  +++E+   DVL +   +E++++LA   +G  YL   G +D++  +++   + P 
Sbjct: 206 SGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPF 265

Query: 685 GGILIPGYMKLFG 723
               +PG++K FG
Sbjct: 266 SSFYLPGFVKFFG 278


>AL161911-6|CAI95117.1|  157|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 5 protein.
          Length = 157

 Score = 38.7 bits (86), Expect = 0.022
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = +1

Query: 577 LMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPVGGILIPGYMKLFG 723
           ++++LA   +G  YL   G +D++  +++   + P     +PG++K FG
Sbjct: 1   MVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFG 49


>BC050356-1|AAH50356.2|  192|Homo sapiens RNF212 protein protein.
          Length = 192

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = +1

Query: 520 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           + ++++QS+    Q     + S+++ KP+G     +S A D+L ++ +DL  SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLQPHSSAPDRLESMEVDLSPSPI 168


>BC101260-1|AAI01261.1|  297|Homo sapiens RNF212 protein protein.
          Length = 297

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = +1

Query: 520 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           + ++++QS+    Q     + S+++ KP+G     +S A D+L ++ +DL  SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168


>BC101259-1|AAI01260.1|  232|Homo sapiens ring finger protein 212
           protein.
          Length = 232

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = +1

Query: 520 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           + ++++QS+    Q     + S+++ KP+G     +S A D+L ++ +DL  SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168


>BC101258-1|AAI01259.1|  232|Homo sapiens ring finger protein 212
           protein.
          Length = 232

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = +1

Query: 520 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           + ++++QS+    Q     + S+++ KP+G     +S A D+L ++ +DL  SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168


>AK096160-1|BAC04714.1|  232|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38841 fis, clone MESAN2003529. ).
          Length = 232

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = +1

Query: 520 IMVQEIQSLDVLYQLNILELMSTLAIKPYGINYLLNSGAMDKLVTVVIDLKTSPV 684
           + ++++QS+    Q     + S+++ KP+G     +S A D+L ++ +DL  SP+
Sbjct: 114 LQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLPPHSSAPDRLESMEVDLSPSPI 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,415,128
Number of Sequences: 237096
Number of extensions: 2155475
Number of successful extensions: 3387
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3387
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)