Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40319
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39648-8|AAK39291.1|  270|Caenorhabditis elegans Beta carbonic a...    30   2.1  
U39648-7|AAM15604.1|  429|Caenorhabditis elegans Beta carbonic a...    30   2.1  
U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AF100656-7|AAF99964.2|  615|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z79758-8|CAI79179.1|  695|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   8.5  

>U39648-8|AAK39291.1|  270|Caenorhabditis elegans Beta carbonic
           anhydrase protein1, isoform a protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = -2

Query: 393 PQNANVSILLQLSVHLHPILSSIVFQSENLEHLIVIGKRDGTSMNT*FPLSRAP 232
           P   N     ++SV+  P    +  +   + H++V G  D  ++NT + L + P
Sbjct: 68  PDAPNYGAFSEVSVNTEPAALELAVKRGGIRHIVVCGHSDCKAINTLYGLHQCP 121


>U39648-7|AAM15604.1|  429|Caenorhabditis elegans Beta carbonic
           anhydrase protein1, isoform b protein.
          Length = 429

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = -2

Query: 393 PQNANVSILLQLSVHLHPILSSIVFQSENLEHLIVIGKRDGTSMNT*FPLSRAP 232
           P   N     ++SV+  P    +  +   + H++V G  D  ++NT + L + P
Sbjct: 227 PDAPNYGAFSEVSVNTEPAALELAVKRGGIRHIVVCGHSDCKAINTLYGLHQCP 280


>U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical
           protein B0412.3 protein.
          Length = 1107

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 58  IYKTHHL*VNITLMAYFQLHCYQFSYLLNLSLVSG 162
           IY T HL  +I L+ +    CYQF++L   S+  G
Sbjct: 320 IYPTPHL-ASIELLLWKSKQCYQFAHLFERSVAGG 353


>AF100656-7|AAF99964.2|  615|Caenorhabditis elegans Hypothetical
           protein F49F1.8 protein.
          Length = 615

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -1

Query: 460 HSSLENSKSKDTKHTKKILAWNTSK-CKCEHFITTLSTFTSYTEFNSISVRKP*ASDSDW 284
           H S +NSK K  K  +K+L  NTS+    E  +  LS  +      S +++K   S S+ 
Sbjct: 456 HKS-KNSKKKVHKIKRKVLQKNTSREVGAEDVLFALSIMSKQIRKLSKAMKKMHTSPSET 514

Query: 283 QKRWNKHEHIVSSQQSS 233
           QK+  +    +SS   S
Sbjct: 515 QKKRKEDPRPISSAPES 531


>Z79758-8|CAI79179.1|  695|Caenorhabditis elegans Hypothetical
           protein W10D5.3g protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 655 IGKIGTRCGIRTPVHRYIRMHRTSYPLSHDVSSYAN 548
           + KIG      T     +++H T++PL+   SSY N
Sbjct: 543 LNKIGESANSSTQSSPLVQLHHTTHPLNFAQSSYMN 578


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 27/120 (22%), Positives = 48/120 (40%)
 Frame = -1

Query: 535 HKNMHSSLQIILFHNLNSI*TAFSRHSSLENSKSKDTKHTKKILAWNTSKCKCEHFITTL 356
           HK   SS       + +S  ++ S  S  E+ K    KH KK L  +  K +     ++ 
Sbjct: 154 HKKAESSSSSSSSSSSSSSSSSSSSSSESEDEKHHHKKHAKKHLKKHHKKAESSSSSSSS 213

Query: 355 STFTSYTEFNSISVRKP*ASDSDWQKRWNKHEHIVSSQQSSFSGE*LDAEKLSTNKIKSH 176
           S+ +S +  +S S  +        +K   K  H  +   SS S     +   S+++ + H
Sbjct: 214 SSSSSSSSSSSSSSSESEDEKHHHKKHAVKKHHKKAESSSSSSSSSSSSSSSSSSEDEKH 273


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,025,917
Number of Sequences: 27780
Number of extensions: 386026
Number of successful extensions: 925
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)